Miyakogusa Predicted Gene

Lj0g3v0231059.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0231059.1 Non Chatacterized Hit- tr|Q9SN56|Q9SN56_ARATH
Putative uncharacterized protein AT4g10980
OS=Arabidop,70.37,0.019,UBN2_3,NULL,CUFF.15105.1
         (189 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598849 weakly similar to UniRef100_A7NZV9 Cluster: Ch...    54   3e-07

>gnl|LJGI|DC598849 weakly similar to UniRef100_A7NZV9 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (54%)
          Length = 535

 Score = 54.0 bits (27), Expect = 3e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 74  tggctttgaatgataaaaacaaacttggattcattgatggaacaatt 120
           ||||||||| || |||||||||| |||||||  ||||||||||||||
Sbjct: 353 tggctttgactgctaaaaacaaatttggatttgttgatggaacaatt 399