Miyakogusa Predicted Gene

Lj0g3v0231049.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0231049.1 Non Chatacterized Hit- tr|B9SIP9|B9SIP9_RICCO
ATP-dependent clp protease ATP-binding subunit clpx,
p,60.87,3e-17,P-loop containing nucleoside triphosphate
hydrolases,NULL; no description,NULL; ClpB_D2-small,Clp
AT,CUFF.15104.1
         (366 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71707 similar to UniRef100_Q06HR0 Cluster: ATP depend...   726   0.0  
gnl|LJGI|TC65198 similar to UniRef100_O48566 Cluster: CLP protea...   726   0.0  

>gnl|LJGI|TC71707 similar to UniRef100_Q06HR0 Cluster: ATP dependent Clp protease
           ATP-binding subunit ClpX1; n=1; Pennisetum glaucum|Rep:
           ATP dependent Clp protease ATP-binding subunit ClpX1 -
           Pennisetum americanum (Pearl millet), partial (53%)
          Length = 718

 Score =  726 bits (366), Expect = 0.0
 Identities = 366/366 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttccaaatcaatggagtaaagctacattttacagaaagcgctctaaaatctattgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  atgttccaaatcaatggagtaaagctacattttacagaaagcgctctaaaatctattgcc 73

                                                                       
Query: 61  agaaaagcaatatctaaaaatactggtgctcggggcttacgatcaatattagagagtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  agaaaagcaatatctaaaaatactggtgctcggggcttacgatcaatattagagagtgtt 133

                                                                       
Query: 121 ttggtagatgccatgtatgagattcctgatatcagaacaggcgacgatgtcatagatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttggtagatgccatgtatgagattcctgatatcagaacaggcgacgatgtcatagatgct 193

                                                                       
Query: 181 gttgttgttgatgaagaggccattggaaaagatgggtgcaggggaggagctaagatcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gttgttgttgatgaagaggccattggaaaagatgggtgcaggggaggagctaagatcctt 253

                                                                       
Query: 241 tatggtaatggtgcattggatcgttatctctctgagcagaaaaatgattcagagaccatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tatggtaatggtgcattggatcgttatctctctgagcagaaaaatgattcagagaccatg 313

                                                                       
Query: 301 gaggcatctggcggagatcatgaatcagagacagaacttccttccattgttgctagcatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gaggcatctggcggagatcatgaatcagagacagaacttccttccattgttgctagcatg 373

                 
Query: 361 taaccc 366
           ||||||
Sbjct: 374 taaccc 379


>gnl|LJGI|TC65198 similar to UniRef100_O48566 Cluster: CLP protease regulatory
           subunit CLPX precursor; n=1; Arabidopsis thaliana|Rep:
           CLP protease regulatory subunit CLPX precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (29%)
          Length = 808

 Score =  726 bits (366), Expect = 0.0
 Identities = 366/366 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttccaaatcaatggagtaaagctacattttacagaaagcgctctaaaatctattgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atgttccaaatcaatggagtaaagctacattttacagaaagcgctctaaaatctattgcc 295

                                                                       
Query: 61  agaaaagcaatatctaaaaatactggtgctcggggcttacgatcaatattagagagtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agaaaagcaatatctaaaaatactggtgctcggggcttacgatcaatattagagagtgtt 355

                                                                       
Query: 121 ttggtagatgccatgtatgagattcctgatatcagaacaggcgacgatgtcatagatgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttggtagatgccatgtatgagattcctgatatcagaacaggcgacgatgtcatagatgct 415

                                                                       
Query: 181 gttgttgttgatgaagaggccattggaaaagatgggtgcaggggaggagctaagatcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gttgttgttgatgaagaggccattggaaaagatgggtgcaggggaggagctaagatcctt 475

                                                                       
Query: 241 tatggtaatggtgcattggatcgttatctctctgagcagaaaaatgattcagagaccatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tatggtaatggtgcattggatcgttatctctctgagcagaaaaatgattcagagaccatg 535

                                                                       
Query: 301 gaggcatctggcggagatcatgaatcagagacagaacttccttccattgttgctagcatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gaggcatctggcggagatcatgaatcagagacagaacttccttccattgttgctagcatg 595

                 
Query: 361 taaccc 366
           ||||||
Sbjct: 596 taaccc 601