Miyakogusa Predicted Gene
- Lj0g3v0230979.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0230979.3 CUFF.15108.3
(327 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75517 634 0.0
gnl|LJGI|TC63660 weakly similar to UniRef100_Q7YDG5 Cluster: Sma... 66 1e-10
gnl|LJGI|BW597776 58 3e-08
>gnl|LJGI|TC75517
Length = 777
Score = 634 bits (320), Expect = 0.0
Identities = 325/327 (99%)
Strand = Plus / Plus
Query: 1 atgctctactacatcacccatcatgtctctatcctttgctgtcgttttagagcaccggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgctctactacatcacccatcatgtctctatcctttgctgtcgttttagagcaccggtg 436
Query: 61 agaaggggcgaaatggaagtgagggtttgcgtgagagaagagaaatcagcgagggtccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agaaggggcgaaatggaagtgagggtttgcgtgagagaagagaaatcagcgagggtccac 496
Query: 121 ggccacggaaaatggaagagatgcaacggttcatcattgttgccatttccaaatctgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggccacggaaaatggaagagatgcaacggttcatcattgttgccatttccaaatctgaca 556
Query: 181 tcaaaactatacatggaagatgataaacccattgcgtgtccaatttttgataaaagtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcaaaactatacatggaagatgataaacccattgcgtgtccaatttttgataaaagtagt 616
Query: 241 aaaggcatcaaagaggagttaggtgatgaacggctctccatggatatgaagaatgaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaaggcatcaaagaggagttaggtgatgaacggctctccatggatatgaagaatgaagaa 676
Query: 301 gaagatgaagaggttatcaaatagtga 327
||||||||||||||||||| || ||||
Sbjct: 677 gaagatgaagaggttatcanattgtga 703
>gnl|LJGI|TC63660 weakly similar to UniRef100_Q7YDG5 Cluster: Small subunit ribosomal
protein; n=2; stem eudicotyledons|Rep: Small subunit
ribosomal protein - Tetracentron sinense, partial (61%)
Length = 1416
Score = 65.9 bits (33), Expect = 1e-10
Identities = 98/121 (80%), Gaps = 9/121 (7%)
Strand = Plus / Minus
Query: 42 tcgttttagagcaccggtgagaaggggcgaaatggaagtgagggtttgcgtgagagaaga 101
||||||| ||||||||| |||||||| ||| ||| ||| ||||||||| ||||||
Sbjct: 192 tcgttttggagcaccggcgagaagggacgacatgcaagcgagggtttgggtgaga----- 138
Query: 102 gaaatcagcgagggtccacggccacggaaaatggaagagatgcaacggttcatcattgtt 161
|||| |||| ||||||||||| ||||||| |||||||| |||| |||||| |||||
Sbjct: 137 ----tcagggaggatccacggccacagaaaatgaaagagatgaaacgattcatcgttgtt 82
Query: 162 g 162
|
Sbjct: 81 g 81
>gnl|LJGI|BW597776
Length = 434
Score = 58.0 bits (29), Expect = 3e-08
Identities = 91/113 (80%), Gaps = 9/113 (7%)
Strand = Plus / Minus
Query: 42 tcgttttagagcaccggtgagaaggggcgaaatggaagtgagggtttgcgtgagagaaga 101
||||||| ||||||||| |||||||| ||| ||| ||| ||||||||| ||||||
Sbjct: 147 tcgttttggagcaccggcgagaagggacgacatgcaagcgagggtttgggtgaga----- 93
Query: 102 gaaatcagcgagggtccacggccacggaaaatggaagagatgcaacggttcat 154
|||| |||| ||||||||||| ||||||| |||||||| |||| |||||
Sbjct: 92 ----tcagggaggatccacggccacagaaaatgaaagagatgaaacgattcat 44