Miyakogusa Predicted Gene

Lj0g3v0230969.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0230969.1 Non Chatacterized Hit- tr|Q5SNE7|Q5SNE7_ORYSJ
Putative uncharacterized protein P0512G09.2-1
OS=Oryza,44.14,5e-19,seg,NULL; DDE_4,NULL; UNCHARACTERIZED,Harbinger
transposase-derived
nuclease,gene.Ljchr0_pseudomol_20120828.path1.gene23772.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62808 similar to UniRef100_A7P4N6 Cluster: Chromosome...    64   7e-10

>gnl|LJGI|TC62808 similar to UniRef100_A7P4N6 Cluster: Chromosome chr4 scaffold_6,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_6, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (83%)
          Length = 2050

 Score = 63.9 bits (32), Expect = 7e-10
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 247  tgttgtgtcttacacaacatttgcgagatgaatggtgacgaaatagaccctg 298
            |||||||| || |||||||||||||||||||| |||||  ||||||||||||
Sbjct: 1547 tgttgtgtgttgcacaacatttgcgagatgaagggtgataaaatagaccctg 1598