Miyakogusa Predicted Gene
- Lj0g3v0230509.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0230509.2 Non Chatacterized Hit- tr|K4BTQ5|K4BTQ5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,28.87,2e-18,seg,NULL; APOPTOTIC CHROMATIN CONDENSATION INDUCER
IN THE NUCLEUS,NULL,CUFF.15082.2
(1308 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82512 similar to UniRef100_Q10KI0 Cluster: SAP domain... 1376 0.0
gnl|LJGI|TC70716 similar to UniRef100_A7PL47 Cluster: Chromosome... 640 0.0
gnl|LJGI|CB827913 similar to UniRef100_UPI0000ECAEC5 Cluster: Al... 430 e-120
gnl|LJGI|TC62237 similar to UniRef100_A7PL47 Cluster: Chromosome... 311 6e-84
gnl|LJGI|TC62733 similar to UniRef100_A7PL47 Cluster: Chromosome... 280 2e-74
gnl|LJGI|AV407701 weakly similar to UniRef100_Q7XIG8 Cluster: Ac... 230 2e-59
>gnl|LJGI|TC82512 similar to UniRef100_Q10KI0 Cluster: SAP domain containing protein,
expressed; n=2; Oryza sativa Japonica Group|Rep: SAP
domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (14%)
Length = 698
Score = 1376 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Plus
Query: 198 aaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaataccaa 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaataccaa 64
Query: 258 taatattacaagtccagacttcaacaagaccattaacagtgatgatgcggggtatcccga 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taatattacaagtccagacttcaacaagaccattaacagtgatgatgcggggtatcccga 124
Query: 318 aaagttgaacttggatagaagttctggtgatgattccatggaagaggatgtgcctgagac 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aaagttgaacttggatagaagttctggtgatgattccatggaagaggatgtgcctgagac 184
Query: 378 taagcaatttgattctaagtttaatgttgatgaacttagtcttagagacaaaggggagaa 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 taagcaatttgattctaagtttaatgttgatgaacttagtcttagagacaaaggggagaa 244
Query: 438 tattgaagtatctattgtgaaggaggaaaataatactgtagttgtgggagatggtctatc 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tattgaagtatctattgtgaaggaggaaaataatactgtagttgtgggagatggtctatc 304
Query: 498 tgcagggaaaagtgatacaaatcttgacattgacatgagtcctgttgccttggctgataa 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgcagggaaaagtgatacaaatcttgacattgacatgagtcctgttgccttggctgataa 364
Query: 558 acggaaatatgctgaacaagcatctgttgggaacaatgagcctgcgaaaaggcaacgcag 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acggaaatatgctgaacaagcatctgttgggaacaatgagcctgcgaaaaggcaacgcag 424
Query: 618 gtggagtactgaaacacgtaaaggagcagatctgcaaagcactactcccagacctcctac 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtggagtactgaaacacgtaaaggagcagatctgcaaagcactactcccagacctcctac 484
Query: 678 tacacccaaggatgagccagttgcgccgaaacgcaacttccccaggtctgattcctttgc 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tacacccaaggatgagccagttgcgccgaaacgcaacttccccaggtctgattcctttgc 544
Query: 738 tgctgctgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgctgctgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattc 604
Query: 798 cctcaggattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttgg 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cctcaggattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttgg 664
Query: 858 caagactgggaaagttagcagtttctggatggac 891
||||||||||||||||||||||||||||||||||
Sbjct: 665 caagactgggaaagttagcagtttctggatggac 698
>gnl|LJGI|TC70716 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 1141
Score = 640 bits (323), Expect = 0.0
Identities = 365/386 (94%)
Strand = Plus / Plus
Query: 923 cgtccattgaagaagccactgaaacacggaatgccgtgtataatttgcaatggcctccaa 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtccattgaagaagccactgaaacacggaatgccgtgtataatttgcaatggcctccaa 60
Query: 983 atggtggacgcctcttaattgctgagtatgttgatcctgaagatgtgaaaatgaagttag 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggtggacgcctcttaattgctgagtatgttgatcctgaagatgtgaaaatgaagttag 120
Query: 1043 aagnnnnnnnnnnnnnnnnnnnnnaggccgcctctgtcagtgttccaacagttgctcctg 1102
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagctcctcctcctcctcctcctcaggccgcctctgtcagtgttccaacagttgctcctg 180
Query: 1103 caccatcttcctcacagccagagccttcccctcgtcagcaaagggagcagcatccaattc 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caccatcttcctcacagccagagccttcccctcgtcagcaaagggagcagcatccaattc 240
Query: 1163 cagttgctcttccacctccaccaccattgtcaagggccccgccagtagcaagggaacggc 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagttgctcttccacctccaccaccattgtcaagggccccgccagtagcaagggaacggc 300
Query: 1223 tgccatccccacctcccctacctgagaaagtggacccacctattgtcactctggatgatc 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgccatccccacctcccctacctgagaaagtggacccacctattgtcactctggatgatc 360
Query: 1283 tcttccgcaaaaccacagcaactcct 1308
||||||||||||||||||||||||||
Sbjct: 361 tcttccgcaaaaccacagcaactcct 386
>gnl|LJGI|CB827913 similar to UniRef100_UPI0000ECAEC5 Cluster: Alpha-fetoprotein
enhancer-binding protein; n=1; Gallus gallus|Rep:
Alpha-fetoprotein, partial (0%)
Length = 567
Score = 430 bits (217), Expect = e-120
Identities = 257/274 (93%), Gaps = 16/274 (5%)
Strand = Plus / Plus
Query: 13 gaatcaagctggataatgagcagtcaaaggtgcagctggatagtgaggactcaaagcccc 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gaatcaagctggataatgagcagtcaaaggtgcagctggatagtgaggactcaaagcccc 353
Query: 73 aactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgactcttctattccgg 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgactcttctattccgg 413
Query: 133 aaaacc----------------aggccggagatggtgcaagaaccatcatccagaaatga 176
|||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 414 aaaaccagaacaagattttgttaggccggagttggtgcaagaaccatcatccagaaatga 473
Query: 177 tgaacctgtttatgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgaacctgtttatgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggc 533
Query: 237 atctgttgaagaaaataccaataatattacaagt 270
||||||||||||||||||||||||||||||||||
Sbjct: 534 atctgttgaagaaaataccaataatattacaagt 567
>gnl|LJGI|TC62237 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 925
Score = 311 bits (157), Expect = 6e-84
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 744 tgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattccctcag 803
|||||| || |||||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 69 tgatgcacccaaagaacgcattgttccaccatcacaaagggccccgacatgttccctcag 128
Query: 804 gattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttggcaagac 863
|||||||||||||||||| ||||||||| |||||||||| ||||| |||||||| || ||
Sbjct: 129 gattgatcgtttcctccgtccatttaccttaaaagcagtacaagagcttcttggtaaaac 188
Query: 864 tgggaaagttagcagtttctggatggaccaaataaagacccattgctatgttacttactc 923
||| || || | ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 189 tggaaatgtcatcagtttctggatggaccaaataaagacccattgctatgtaacttactc 248
Query: 924 gtccattgaagaagccactgaaacacggaatgccgtgtataatttgcaatggcctccaaa 983
|| | || ||||||| ||||||||| ||||| ||||||||| |||||||||||| |||
Sbjct: 249 atctgtcgaggaagccattgaaacacgaaatgctgtgtataatctgcaatggcctcgaaa 308
Query: 984 tggtggacgcctcttaattgctgagtatgttgatcctgaagatgtgaaaatgaagttaga 1043
||| |||| ||| ||| ||||||||||||| |||||| |||| |||||||||||| ||||
Sbjct: 309 tggcggacaccttttagttgctgagtatgtggatcctcaagaagtgaaaatgaagctaga 368
Query: 1044 a 1044
|
Sbjct: 369 a 369
Score = 56.0 bits (28), Expect = 6e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1246 gagaaagtggacccacctattgtcactctggatgatctcttccgcaaaacca 1297
|||||||| |||| |||||||||||| || ||||||||||| || |||||||
Sbjct: 565 gagaaagttgaccgacctattgtcacacttgatgatctctttcgtaaaacca 616
>gnl|LJGI|TC62733 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1429
Score = 280 bits (141), Expect = 2e-74
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 1 atgaggattctggaatcaagctggataatgagcagtcaaaggtgcagctggatagtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 atgaggattctggaatcaagctggataatgagcagtcaaaggtgcagctggatagtgagg 1143
Query: 61 actcaaagccccaactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 actcaaagccccaactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgact 1203
Query: 121 cttctattccggaaaaccagg 141
|||||||||||||||||||||
Sbjct: 1204 cttctattccggaaaaccagg 1224
Score = 135 bits (68), Expect = 8e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 139 aggccggagatggtgcaagaaccatcatccagaaatgatgaacctgtttatgatgaatca 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 aggccggagatggtgcaagaaccatcatccagaaatgatgaacctgtttatgatgaatca 1421
Query: 199 aattcaat 206
||||||||
Sbjct: 1422 aattcaat 1429
>gnl|LJGI|AV407701 weakly similar to UniRef100_Q7XIG8 Cluster: AcinusL protein-like;
n=1; Oryza sativa Japonica Group|Rep: AcinusL
protein-like - Oryza sativa subsp. japonica (Rice),
partial (6%)
Length = 398
Score = 230 bits (116), Expect = 2e-59
Identities = 262/311 (84%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 188 atgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaag 247
|||||| |||| |||| ||||||||||||| || ||| |||||||| || ||||||| |
Sbjct: 26 atgatgtatcacattcgatggatgttggagagccacataagaaaaagacacctgttgagg 85
Query: 248 aaaataccaataatattacaagtccagacttcaacaagaccattaacagtgatgatgcgg 307
|||||| | |||||| || ||||||| || | |||||| ||| || |||||| |||| |
Sbjct: 86 aaaatagctataataataaaagtccaaacctgaacaagcccaatagcagtgaagatgttg 145
Query: 308 ggtatcccgaaaagttgaacttggatagaagttctggtgatgattccatggaagaggatg 367
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agtatccagaaaagttaaacttggatagaagttctggtgatgattccatggaagaggatt 205
Query: 368 tgcctgagactaagcaatttgattctaagtttaatgttgatgaacttagtcttagagaca 427
||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 206 tgcctgagagcaagcaatatgattctaagtttaatgttgatgaa------cttagagaca 259
Query: 428 aaggggagaatattgaagtatctattgtgaaggaggaaaataatactgtagttgtgggag 487
| ||||||| | ||||||| ||||| ||||||| ||| | ||||| |||||| ||||
Sbjct: 260 agggggagagtgttgaagtgtctatattgaaggaagaaggtcgtactgcagttgtcggag 319
Query: 488 atggtctatct 498
|||||||||||
Sbjct: 320 atggtctatct 330