Miyakogusa Predicted Gene
- Lj0g3v0230509.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0230509.1 tr|A9SKT2|A9SKT2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_233549,40.49,1e-17,Putative DNA-binding (bihelical)
motif predi,DNA-binding SAP; SAP,DNA-binding SAP; no
description,DN,CUFF.15082.1
(1785 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62733 similar to UniRef100_A7PL47 Cluster: Chromosome... 1711 0.0
gnl|LJGI|TC82512 similar to UniRef100_Q10KI0 Cluster: SAP domain... 1376 0.0
gnl|LJGI|CB827913 similar to UniRef100_UPI0000ECAEC5 Cluster: Al... 569 e-161
gnl|LJGI|AU252033 similar to UniRef100_A7PL47 Cluster: Chromosom... 293 2e-78
gnl|LJGI|TC80683 similar to UniRef100_A7PL47 Cluster: Chromosome... 246 4e-64
gnl|LJGI|AV407701 weakly similar to UniRef100_Q7XIG8 Cluster: Ac... 230 2e-59
gnl|LJGI|TC62237 similar to UniRef100_A7PL47 Cluster: Chromosome... 204 1e-51
gnl|LJGI|FS324580 similar to UniRef100_A7PL47 Cluster: Chromosom... 92 1e-17
>gnl|LJGI|TC62733 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1429
Score = 1711 bits (863), Expect = 0.0
Identities = 863/863 (100%)
Strand = Plus / Plus
Query: 202 tctgagaaggacgatgctgaaaggaagggtgctgatcctcctgatgctgaaagggaggga 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctgagaaggacgatgctgaaaggaagggtgctgatcctcctgatgctgaaagggaggga 626
Query: 262 gctgtggcatctgagaaggacgaggccaatggggttgacggggatgtagctggtgtgaaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gctgtggcatctgagaaggacgaggccaatggggttgacggggatgtagctggtgtgaaa 686
Query: 322 gattcccagacagtaactgttgatgctgaagcagcggatgtgaatgaaaaggaaagggct 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gattcccagacagtaactgttgatgctgaagcagcggatgtgaatgaaaaggaaagggct 746
Query: 382 caaacaattgaaacttctgaaaaggtgactagtgttgaagttgagacaattgaaacagaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 caaacaattgaaacttctgaaaaggtgactagtgttgaagttgagacaattgaaacagaa 806
Query: 442 aatgcagagaagattcctcctgaggttgtggattatgacagcaataagaatgacaagcag 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aatgcagagaagattcctcctgaggttgtggattatgacagcaataagaatgacaagcag 866
Query: 502 gatggtgttaccataccaattgacatcaataatagtgtgtcaacaatggatcaagaaatt 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 gatggtgttaccataccaattgacatcaataatagtgtgtcaacaatggatcaagaaatt 926
Query: 562 gaatactcgcggttgccagctggtgcagattctgcaaacgcgggagaggatgttattgtc 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 gaatactcgcggttgccagctggtgcagattctgcaaacgcgggagaggatgttattgtc 986
Query: 622 cattcttctaccttggagaccactgttacaatcactgagactgtattaacagaagtagta 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 cattcttctaccttggagaccactgttacaatcactgagactgtattaacagaagtagta 1046
Query: 682 gtcagtggtcaggattctgacagggtatacaagaataatgaggattctggaatcaagctg 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 gtcagtggtcaggattctgacagggtatacaagaataatgaggattctggaatcaagctg 1106
Query: 742 gataatgagcagtcaaaggtgcagctggatagtgaggactcaaagccccaactgcagtgt 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 gataatgagcagtcaaaggtgcagctggatagtgaggactcaaagccccaactgcagtgt 1166
Query: 802 gacacaaaggccctttgcgaggatctcatgcccgactcttctattccggaaaaccaggta 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 gacacaaaggccctttgcgaggatctcatgcccgactcttctattccggaaaaccaggta 1226
Query: 862 tctgaggtcaaccctagtttagggtctcaagtaaaatctgattctatttctactgattct 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 tctgaggtcaaccctagtttagggtctcaagtaaaatctgattctatttctactgattct 1286
Query: 922 gtgtcaattaatcaaaagaatgaactaaaggatactataattgctgataatgtcaaatta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 gtgtcaattaatcaaaagaatgaactaaaggatactataattgctgataatgtcaaatta 1346
Query: 982 gaacaagattttgttaggccggagatggtgcaagaaccatcatccagaaatgatgaacct 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 gaacaagattttgttaggccggagatggtgcaagaaccatcatccagaaatgatgaacct 1406
Query: 1042 gtttatgatgaatcaaattcaat 1064
|||||||||||||||||||||||
Sbjct: 1407 gtttatgatgaatcaaattcaat 1429
Score = 276 bits (139), Expect = 5e-73
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 1 atgttgacgtcaagagttctcgacaatcggcccattcatcagtggaaggttacggagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atgttgacgtcaagagttctcgacaatcggcccattcatcagtggaaggttacggagctg 425
Query: 61 agagaggagctgaagagaaggaggttaactaccaaaggtttgaaggatgatttaatcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agagaggagctgaagagaaggaggttaactaccaaaggtttgaaggatgatttaatcagg 485
Query: 121 cgtttggatgaagcccttc 139
|||||||||||||||||||
Sbjct: 486 cgtttggatgaagcccttc 504
>gnl|LJGI|TC82512 similar to UniRef100_Q10KI0 Cluster: SAP domain containing protein,
expressed; n=2; Oryza sativa Japonica Group|Rep: SAP
domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (14%)
Length = 698
Score = 1376 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Plus
Query: 1056 aaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaataccaa 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaataccaa 64
Query: 1116 taatattacaagtccagacttcaacaagaccattaacagtgatgatgcggggtatcccga 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 taatattacaagtccagacttcaacaagaccattaacagtgatgatgcggggtatcccga 124
Query: 1176 aaagttgaacttggatagaagttctggtgatgattccatggaagaggatgtgcctgagac 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aaagttgaacttggatagaagttctggtgatgattccatggaagaggatgtgcctgagac 184
Query: 1236 taagcaatttgattctaagtttaatgttgatgaacttagtcttagagacaaaggggagaa 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 taagcaatttgattctaagtttaatgttgatgaacttagtcttagagacaaaggggagaa 244
Query: 1296 tattgaagtatctattgtgaaggaggaaaataatactgtagttgtgggagatggtctatc 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tattgaagtatctattgtgaaggaggaaaataatactgtagttgtgggagatggtctatc 304
Query: 1356 tgcagggaaaagtgatacaaatcttgacattgacatgagtcctgttgccttggctgataa 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgcagggaaaagtgatacaaatcttgacattgacatgagtcctgttgccttggctgataa 364
Query: 1416 acggaaatatgctgaacaagcatctgttgggaacaatgagcctgcgaaaaggcaacgcag 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acggaaatatgctgaacaagcatctgttgggaacaatgagcctgcgaaaaggcaacgcag 424
Query: 1476 gtggagtactgaaacacgtaaaggagcagatctgcaaagcactactcccagacctcctac 1535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtggagtactgaaacacgtaaaggagcagatctgcaaagcactactcccagacctcctac 484
Query: 1536 tacacccaaggatgagccagttgcgccgaaacgcaacttccccaggtctgattcctttgc 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tacacccaaggatgagccagttgcgccgaaacgcaacttccccaggtctgattcctttgc 544
Query: 1596 tgctgctgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattc 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgctgctgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattc 604
Query: 1656 cctcaggattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttgg 1715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cctcaggattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttgg 664
Query: 1716 caagactgggaaagttagcagtttctggatggac 1749
||||||||||||||||||||||||||||||||||
Sbjct: 665 caagactgggaaagttagcagtttctggatggac 698
>gnl|LJGI|CB827913 similar to UniRef100_UPI0000ECAEC5 Cluster: Alpha-fetoprotein
enhancer-binding protein; n=1; Gallus gallus|Rep:
Alpha-fetoprotein, partial (0%)
Length = 567
Score = 569 bits (287), Expect = e-161
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 202 tctgagaaggacgatgctgaaaggaagggtgctgatcctcctgatgctgaaagggaggga 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tctgagaaggacgatgctgaaaggaagggtgctgatcctcctgatgctgaaagggaggga 66
Query: 262 gctgtggcatctgagaaggacgaggccaatggggttgacggggatgtagctggtgtgaaa 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gctgtggcatctgagaaggacgaggccaatggggttgacggggatgtagctggtgtgaaa 126
Query: 322 gattcccagacagtaactgttgatgctgaagcagcggatgtgaatgaaaaggaaagggct 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gattcccagacagtaactgttgatgctgaagcagcggatgtgaatgaaaaggaaagggct 186
Query: 382 caaacaattgaaacttctgaaaaggtgactagtgttgaagttgagacaattgaaacagaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 caaacaattgaaacttctgaaaaggtgactagtgttgaagttgagacaattgaaacagaa 246
Query: 442 aatgcagagaagattcctcctgaggttgtggattatgacagcaataagaat 492
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 247 aatgcagagaagattcctcctgaggttgtggattatgacagcaacaagaat 297
Score = 285 bits (144), Expect = 5e-76
Identities = 147/148 (99%)
Strand = Plus / Plus
Query: 981 agaacaagattttgttaggccggagatggtgcaagaaccatcatccagaaatgatgaacc 1040
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 420 agaacaagattttgttaggccggagttggtgcaagaaccatcatccagaaatgatgaacc 479
Query: 1041 tgtttatgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggcatctgt 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgtttatgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggcatctgt 539
Query: 1101 tgaagaaaataccaataatattacaagt 1128
||||||||||||||||||||||||||||
Sbjct: 540 tgaagaaaataccaataatattacaagt 567
Score = 254 bits (128), Expect = 2e-66
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 731 gaatcaagctggataatgagcagtcaaaggtgcagctggatagtgaggactcaaagcccc 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gaatcaagctggataatgagcagtcaaaggtgcagctggatagtgaggactcaaagcccc 353
Query: 791 aactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgactcttctattccgg 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgactcttctattccgg 413
Query: 851 aaaaccag 858
||||||||
Sbjct: 414 aaaaccag 421
>gnl|LJGI|AU252033 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 335
Score = 293 bits (148), Expect = 2e-78
Identities = 223/248 (89%)
Strand = Plus / Plus
Query: 778 gactcaaagccccaactgcagtgtgacacaaaggccctttgcgaggatctcatgcccgac 837
||||||||||| || ||| | |||||| |||| || | ||||||||||||| ||| ||
Sbjct: 54 gactcaaagcctcagctggattgtgacctaaagcccttgtgcgaggatctcacacccaac 113
Query: 838 tcttctattccggaaaaccaggtatctgaggtcaaccctagtttagggtctcaagtaaaa 897
|||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 114 tcttctcttcctgaaaatcaggtatctgaggtcaaccctagtttagggtctcacctaaaa 173
Query: 898 tctgattctatttctactgattctgtgtcaattaatcaaaagaatgaactaaaggatact 957
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tctgattctatttctagtaattctgtgtcaattaatcaaaagaatgaactaaaggatact 233
Query: 958 ataattgctgataatgtcaaattagaacaagattttgttaggccggagatggtgcaagaa 1017
||||||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||||
Sbjct: 234 ataattgctgataatgttaaattagaggaagatattgttaggccagagatggtggaagaa 293
Query: 1018 ccatcatc 1025
||||||||
Sbjct: 294 ccatcatc 301
>gnl|LJGI|TC80683 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 486
Score = 246 bits (124), Expect = 4e-64
Identities = 137/140 (97%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 1 atgttgacgtcaagagttctcgacaatcggcccattcatcagtg-gaaggttacggagct 59
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 346 atgttgacgtcaagagttctcgacaatcggcccattcatcaatgagaaggttacggagct 405
Query: 60 gagagaggagctgaagagaaggaggttaactaccaaaggtttgaaggatgatttaatcag 119
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gagagaggagctgaacagaaggaggttaactaccaaaggtttgaaggatgatttaatcag 465
Query: 120 gcgtttggatgaagcccttc 139
||||||||||||||||||||
Sbjct: 466 gcgtttggatgaagcccttc 485
>gnl|LJGI|AV407701 weakly similar to UniRef100_Q7XIG8 Cluster: AcinusL protein-like;
n=1; Oryza sativa Japonica Group|Rep: AcinusL
protein-like - Oryza sativa subsp. japonica (Rice),
partial (6%)
Length = 398
Score = 230 bits (116), Expect = 2e-59
Identities = 262/311 (84%), Gaps = 6/311 (1%)
Strand = Plus / Plus
Query: 1046 atgatgaatcaaattcaatggatgttggagggctgcatgagaaaaaggcatctgttgaag 1105
|||||| |||| |||| ||||||||||||| || ||| |||||||| || ||||||| |
Sbjct: 26 atgatgtatcacattcgatggatgttggagagccacataagaaaaagacacctgttgagg 85
Query: 1106 aaaataccaataatattacaagtccagacttcaacaagaccattaacagtgatgatgcgg 1165
|||||| | |||||| || ||||||| || | |||||| ||| || |||||| |||| |
Sbjct: 86 aaaatagctataataataaaagtccaaacctgaacaagcccaatagcagtgaagatgttg 145
Query: 1166 ggtatcccgaaaagttgaacttggatagaagttctggtgatgattccatggaagaggatg 1225
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 agtatccagaaaagttaaacttggatagaagttctggtgatgattccatggaagaggatt 205
Query: 1226 tgcctgagactaagcaatttgattctaagtttaatgttgatgaacttagtcttagagaca 1285
||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 206 tgcctgagagcaagcaatatgattctaagtttaatgttgatgaa------cttagagaca 259
Query: 1286 aaggggagaatattgaagtatctattgtgaaggaggaaaataatactgtagttgtgggag 1345
| ||||||| | ||||||| ||||| ||||||| ||| | ||||| |||||| ||||
Sbjct: 260 agggggagagtgttgaagtgtctatattgaaggaagaaggtcgtactgcagttgtcggag 319
Query: 1346 atggtctatct 1356
|||||||||||
Sbjct: 320 atggtctatct 330
>gnl|LJGI|TC62237 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 925
Score = 204 bits (103), Expect = 1e-51
Identities = 154/171 (90%)
Strand = Plus / Plus
Query: 1602 tgatgctcctaaagaacgcattgttccaccatcacaaaggaccccaactaattccctcag 1661
|||||| || |||||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 69 tgatgcacccaaagaacgcattgttccaccatcacaaagggccccgacatgttccctcag 128
Query: 1662 gattgatcgtttcctccgaccatttaccctaaaagcagtgcaagaacttcttggcaagac 1721
|||||||||||||||||| ||||||||| |||||||||| ||||| |||||||| || ||
Sbjct: 129 gattgatcgtttcctccgtccatttaccttaaaagcagtacaagagcttcttggtaaaac 188
Query: 1722 tgggaaagttagcagtttctggatggaccaaataaagacccattgctatgt 1772
||| || || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tggaaatgtcatcagtttctggatggaccaaataaagacccattgctatgt 239
>gnl|LJGI|FS324580 similar to UniRef100_A7PL47 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 444
Score = 91.7 bits (46), Expect = 1e-17
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 38 atcagtggaaggttacggagctgagagaggagctgaagagaaggaggttaactaccaaag 97
||||||||| |||||||||||| | ||||||| | |||||||||| |||| |||||||
Sbjct: 228 atcagtggagggttacggagctaaaagaggagttaaagagaaggaaactaaccaccaaag 287
Query: 98 gtttgaaggatgatttaatcaggcgtttggatgaagcccttc 139
|||| ||||||||||| |||| |||||||||| |||| ||||
Sbjct: 288 gtttaaaggatgatttgatcaagcgtttggatcaagctcttc 329