Miyakogusa Predicted Gene

Lj0g3v0230329.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0230329.1 Non Chatacterized Hit- tr|B4VF03|B4VF03_9ACTO
Putative uncharacterized protein (Fragment) OS=Strepto,30.95,1.2,
,CUFF.15048.1
         (343 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO040426 similar to UniRef100_A7BS46 Cluster: Transposa...   680   0.0  

>gnl|LJGI|GO040426 similar to UniRef100_A7BS46 Cluster: Transposase, IS4; n=1;
           Beggiatoa sp. PS|Rep: Transposase, IS4 - Beggiatoa sp.
           PS, partial (8%)
          Length = 787

 Score =  680 bits (343), Expect = 0.0
 Identities = 343/343 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggagagttggtcgccggagaagagtgatgtcctacaattgcagaaaacttggggcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 atggagagttggtcgccggagaagagtgatgtcctacaattgcagaaaacttggggcact 620

                                                                       
Query: 61  tcaatggcggcgaaaaacttatcccttgagatgcagaggatcaaacttgaaacaatactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcaatggcggcgaaaaacttatcccttgagatgcagaggatcaaacttgaaacaatactt 560

                                                                       
Query: 121 gcaagacgaagtgctaggctgaatctcggagttcgacgtacacaaccaacccaggtgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcaagacgaagtgctaggctgaatctcggagttcgacgtacacaaccaacccaggtgttg 500

                                                                       
Query: 181 gccaggaggcctccgccaaaaccaccagattcaagcctccttcatgtaagaacagttggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gccaggaggcctccgccaaaaccaccagattcaagcctccttcatgtaagaacagttggg 440

                                                                       
Query: 241 aatctgtgggtagagagcaagaatcttttcctgcgacccccgccaaagccaccggataca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aatctgtgggtagagagcaagaatcttttcctgcgacccccgccaaagccaccggataca 380

                                                      
Query: 301 ggcttccttcgtgtgagaaaaattgggaatctgtggccataat 343
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggcttccttcgtgtgagaaaaattgggaatctgtggccataat 337