Miyakogusa Predicted Gene
- Lj0g3v0230119.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0230119.1 CUFF.15030.1
(402 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82286 644 0.0
gnl|LJGI|TC79171 homologue to UniRef100_A9STE5 Cluster: Predicte... 151 4e-36
gnl|LJGI|BP066011 145 2e-34
gnl|LJGI|TC69684 135 2e-31
gnl|LJGI|TC74698 113 8e-25
gnl|LJGI|TC73716 52 3e-06
>gnl|LJGI|TC82286
Length = 910
Score = 644 bits (325), Expect = 0.0
Identities = 351/364 (96%)
Strand = Plus / Plus
Query: 39 aggaagctttgacaaagtggattgcttgtctgttatgtgtgggaggtcaagtccaaagtc 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aggaagctttgacaaagtggattgcttgtctgttatgtgtgggaggtcaagtccaaagtc 604
Query: 99 tgatataggtgcagttttgcttgtttgctgtttgtacagagtggtgtgggtctgtgggct 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgatataggtgcagttttgcttgtttgctgtttgtacagagtggtgtgggtctgtgggct 664
Query: 159 atcagcatgttttactcgtgctggagcctggaggaagaagagtggaggctcacccccgag 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atcagcatgttttactcgtgctggagcctggaggaagaagagtggaggctcacccccgag 724
Query: 219 agtggcctccacactctcccccacttgccggttcggtccttgtcataaaccagtcaacaa 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agtggcctccacactctcccccacttgccggttcggtccttgtcataaaccagtcaacaa 784
Query: 279 cggtgcaagccaggnnnnnnnnnnnnnccagtggttaaacaattttaaccagatccaaat 338
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 785 cggtgcaagccaggaaaaaacgaaaaaccagtggttaaacaattttaaccagatccaaat 844
Query: 339 ctacatgctcaggcggcacggttccttcacttctgtcagtttcattgaacacttttttat 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ctacatgctcaggcggcacggttccttcacttctgtcagtttcattgaacacttttttat 904
Query: 399 gtga 402
||||
Sbjct: 905 gtga 908
Score = 81.8 bits (41), Expect = 3e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 atgaccaggaaatatcagggtgaaattgctcagggaaaagg 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgaccaggaaatatcagggtgaaattgctcagggaaaagg 215
>gnl|LJGI|TC79171 homologue to UniRef100_A9STE5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(7%)
Length = 1023
Score = 151 bits (76), Expect = 4e-36
Identities = 135/159 (84%)
Strand = Plus / Plus
Query: 244 tgccggttcggtccttgtcataaaccagtcaacaacggtgcaagccaggnnnnnnnnnnn 303
|||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 217 tgccggtttggtccttgtcataaatcggtcaacaacggtgcaagccaggaaaaactgaaa 276
Query: 304 nnccagtggttaaacaattttaaccagatccaaatctacatgctcaggcggcacggttcc 363
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 277 atccagtggttaatcaattttaaccagatccaaatctacatgctcaggcggcacaattcc 336
Query: 364 ttcacttctgtcagtttcattgaacacttttttatgtga 402
|||||||||||||||| || ||||| |||||||||||
Sbjct: 337 ttcacttctgtcagttccaagtaacacctttttatgtga 375
>gnl|LJGI|BP066011
Length = 486
Score = 145 bits (73), Expect = 2e-34
Identities = 117/136 (86%)
Strand = Plus / Minus
Query: 244 tgccggttcggtccttgtcataaaccagtcaacaacggtgcaagccaggnnnnnnnnnnn 303
|||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 430 tgccggtttggtccttgtcataaatcggtcaacaacggtgcaagccaggaaaaactgaaa 371
Query: 304 nnccagtggttaaacaattttaaccagatccaaatctacatgctcaggcggcacggttcc 363
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 370 atccagtggttaatcaattttaaccagatccaaatctacatgctcaggcggcacaattcc 311
Query: 364 ttcacttctgtcagtt 379
||||||||||||||||
Sbjct: 310 ttcacttctgtcagtt 295
>gnl|LJGI|TC69684
Length = 1124
Score = 135 bits (68), Expect = 2e-31
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 244 tgccggttcggtccttgtcataaaccagtcaacaacggtgcaagccaggnnnnnnnnnnn 303
|||||||| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 697 tgccggtttggtccttgtcataaatcggtcaacaacggtgcaagccaggaaaaactgaaa 756
Query: 304 nnccagtggttaaacaattttaaccagatccaaatctacatgctcaggcggcacggttcc 363
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 757 atccagtggttaatcaattttaaccagatccaaatctacatgctcaggcggcacaattcc 816
Query: 364 ttcacttctgt 374
|||||||||||
Sbjct: 817 ttcacttctgt 827
>gnl|LJGI|TC74698
Length = 506
Score = 113 bits (57), Expect = 8e-25
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 306 ccagtggttaaacaattttaaccagatccaaatctacatgctcaggcggcacggttcctt 365
|||||||||| |||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 147 ccagtggttagtcaatgttaactagatccaaatctacatgctcaggcggcacagttcctt 88
Query: 366 cacttctgtcagtttcattgaacacttttttatgtga 402
|||||||||||||| || ||||| |||||||||||
Sbjct: 87 cacttctgtcagttccaagtaacacatttttatgtga 51
>gnl|LJGI|TC73716
Length = 559
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 gaaatatcagggtgaaattgctcagggaaa 38
|||||||| |||||||||||||||||||||
Sbjct: 277 gaaatatcggggtgaaattgctcagggaaa 306