Miyakogusa Predicted Gene

Lj0g3v0229879.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0229879.2 tr|B9I7N3|B9I7N3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1097327 PE=3
SV=1,60.87,0.00000008,seg,NULL,CUFF.15033.2
         (996 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055863 similar to UniRef100_Q3LHS9 Cluster: DNA polym...   932   0.0  

>gnl|LJGI|BP055863 similar to UniRef100_Q3LHS9 Cluster: DNA polymerase; n=1; Nicotiana
           tabacum|Rep: DNA polymerase - Nicotiana tabacum (Common
           tobacco), partial (4%)
          Length = 559

 Score =  932 bits (470), Expect = 0.0
 Identities = 489/494 (98%), Gaps = 1/494 (0%)
 Strand = Plus / Plus

                                                                       
Query: 497 tagctgaaggtaaaaaggaaatgaatgacccaagcaaatttgagaggaaaattggtagtt 556
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 23  tagctgaaggtaaaaaggaaatgaatgacccaagcaaatttgagaggaaaat-ggtagtt 81

                                                                       
Query: 557 cttacgcgtctaatcgatttacttccgttggtcagaaacaagctgtttccaagaatgcga 616
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  cttacgcgtctaatcgatttacttccgttggtcagaaacaagctgtttccaagaatgcga 141

                                                                       
Query: 617 ttagcaaccttgtactccaggaccatagtgaacatgtctcatcttctgttaaatcttctg 676
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ttagcaaccttgtactccaggaccatagtgaacatgtctcatcttctgttaaatcttctg 201

                                                                       
Query: 677 tattaaaccattcaaaggtgattacagattcagaaacagtggtccgccagtttaatgaat 736
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 202 tattaaaccattcaaaggtgattacagattcagaaacagtggtccgccaatttaatgaat 261

                                                                       
Query: 737 cttcattagagatcagtgaagagaaaattactagagttaacggtgattgcagttttgatg 796
           ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 262 cttcattagagatcagtgaagagaaaattaccagagttaatggtgattgcagttttgatg 321

                                                                       
Query: 797 taactacagaggagtcaagtaatgcaacaattcctagagaagcacacggtactgacaaat 856
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taactacagaggagtcaagtaatgcaacaattcctagagaagcacacggtactgacaaat 381

                                                                       
Query: 857 caagacttcgggacagactctgcagtatctatgaagatattctggtggttgataatattc 916
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 caagacttcgggacagactctgcagtatctatgaagatattctggtggttgataatattc 441

                                                                       
Query: 917 ctcttgctgaggaagttgctaagatgctcacaggaaagtaccagcatcttatttatgcat 976
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 ctcttgctgaggaagttgctaagatgctcacaggaaagtaccggcatcttatttatgcat 501

                         
Query: 977 gtgatactgaggta 990
           ||||||||||||||
Sbjct: 502 gtgatactgaggta 515