Miyakogusa Predicted Gene

Lj0g3v0229489.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0229489.1 CUFF.14999.1
         (607 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61289 similar to UniRef100_Q2HUH9 Cluster: K+ channel...  1187   0.0  

>gnl|LJGI|TC61289 similar to UniRef100_Q2HUH9 Cluster: K+ channel tetramerisation;
           n=1; Medicago truncatula|Rep: K+ channel tetramerisation
           - Medicago truncatula (Barrel medic), partial (40%)
          Length = 906

 Score = 1187 bits (599), Expect = 0.0
 Identities = 599/599 (100%)
 Strand = Plus / Plus

                                                                       
Query: 9   tgggaagctgacgtgggttccggcgaccggagtactcgttggaagcgcggtcactggtgg 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgggaagctgacgtgggttccggcgaccggagtactcgttggaagcgcggtcactggtgg 60

                                                                       
Query: 69  tgcgttcggttactcgggctacatccgggtgtgggaccctaggtctggggaggtggtttg 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgcgttcggttactcgggctacatccgggtgtgggaccctaggtctggggaggtggtttg 120

                                                                       
Query: 129 ggagacgagcgagcccggttcgggccggagcagtaggttcggggattcgtttgccgcggt 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggagacgagcgagcccggttcgggccggagcagtaggttcggggattcgtttgccgcggt 180

                                                                       
Query: 189 tggggttgatgtggaagggttgttgttgtttaaggtgtgttctaagtcgggggatgtggc 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggggttgatgtggaagggttgttgttgtttaaggtgtgttctaagtcgggggatgtggc 240

                                                                       
Query: 249 tatggcggatatgcggctattgggggatgatccttgggtttatttgaatgagaaaaaccc 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatggcggatatgcggctattgggggatgatccttgggtttatttgaatgagaaaaaccc 300

                                                                       
Query: 309 tagcttggtggctagtggtgttgatggaagcagtaatgtgctgcattgttataaggggca 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagcttggtggctagtggtgttgatggaagcagtaatgtgctgcattgttataaggggca 360

                                                                       
Query: 369 agtgtttgtgggaaggggtggagagttggaggtttggtcgaggttgagagaggcgggtag 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtgtttgtgggaaggggtggagagttggaggtttggtcgaggttgagagaggcgggtag 420

                                                                       
Query: 429 tgaaaatgctgaggggttttataggaggaattttgtggataagagaggggattcagagag 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaaaatgctgaggggttttataggaggaattttgtggataagagaggggattcagagag 480

                                                                       
Query: 489 aggggttatcaagaagattgaaggtggtggagataggttgtttgttagcagggaaggtgt 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggggttatcaagaagattgaaggtggtggagataggttgtttgttagcagggaaggtgt 540

                                                                      
Query: 549 tgaaggtattgaagtgtgggagagctcccattctgttaaatccatttctgttttgtgac 607
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgaaggtattgaagtgtgggagagctcccattctgttaaatccatttctgttttgtgac 599