Miyakogusa Predicted Gene
- Lj0g3v0228619.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0228619.1 Non Chatacterized Hit- tr|I0YZF3|I0YZF3_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,37.11,2e-18,SIN3B-RELATED,NULL,CUFF.14920.1
(450 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW600158 similar to UniRef100_A7Q2L0 Cluster: Chromosom... 611 e-174
gnl|LJGI|TC71048 similar to UniRef100_A7Q2L0 Cluster: Chromosome... 157 7e-38
gnl|LJGI|FS338331 similar to UniRef100_A7Q2L0 Cluster: Chromosom... 72 3e-12
gnl|LJGI|TC61778 similar to UniRef100_A7Q2L0 Cluster: Chromosome... 72 3e-12
>gnl|LJGI|BW600158 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 436
Score = 611 bits (308), Expect = e-174
Identities = 308/308 (100%)
Strand = Plus / Plus
Query: 1 atggataacaagcttcttcaactatttacatatgagcaatcaagaaaacctggaaaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggataacaagcttcttcaactatttacatatgagcaatcaagaaaacctggaaaattt 188
Query: 61 gttgatttggtttatcatgaaaatgcgcgtgttcttcttcctgatgaaaacatatatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gttgatttggtttatcatgaaaatgcgcgtgttcttcttcctgatgaaaacatatatcgt 248
Query: 121 attgaatgttcagctgcacctacccgattgtctattcaactcatgcgctatggacatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 attgaatgttcagctgcacctacccgattgtctattcaactcatgcgctatggacatgat 308
Query: 181 aaacctgaagtggctgccgtaacaatggatcctaatttttcagcatatctgcacaatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaacctgaagtggctgccgtaacaatggatcctaatttttcagcatatctgcacaatgat 368
Query: 241 ttcctgtctgttgtccctgataaaaaggaaaagtctggaattttcttgaaaaggaataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttcctgtctgttgtccctgataaaaaggaaaagtctggaattttcttgaaaaggaataaa 428
Query: 301 cggaaata 308
||||||||
Sbjct: 429 cggaaata 436
>gnl|LJGI|TC71048 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 892
Score = 157 bits (79), Expect = 7e-38
Identities = 342/429 (79%), Gaps = 3/429 (0%)
Strand = Plus / Plus
Query: 1 atggataacaagcttcttcaactatttacatatgagcaatcaagaaaacctggaaaattt 60
|||||||| || ||||| ||| ||| | | |||||| | |||||||||| ||||| |||
Sbjct: 7 atggataataaacttctccaattatatgcgtatgagaagtcaagaaaactaggaaagttt 66
Query: 61 gttgatttggtttatcatgaaaatgcgcgtgttcttcttcctgatgaaaacatatatcgt 120
| ||| | ||||||||||||||||| ||||| |||||| ||| || ||||||||||||
Sbjct: 67 atcgatatagtttatcatgaaaatgcatgtgttattcttcatgaagagaacatatatcgt 126
Query: 121 attgaatgttcagctgcacctacccgattgtctattcaactcatgcgctatggacatgat 180
||||||| |||| ||| ||| | | | ||||||||||| ||| || ||||||||||
Sbjct: 127 attgaatattcacctggaccaaagaaactttctattcaactgatggactgtggacatgat 186
Query: 181 aaacctgaagtggctgccgtaacaatggatcctaatttttcagcatatctgcacaatgat 240
|| ||||||||| | || || || | || ||||| ||||| | ||||||||||||||
Sbjct: 187 aagcctgaagtgacagctgtgtcagtcgaccctaaattttctacctatctgcacaatgac 246
Query: 241 ttcctgtctgttgtccctgataaaaaggaaaagtctggaattttcttgaaaaggaataaa 300
|| || ||||| |||||||| ||||||||||| || | |||||||||| |||||||||
Sbjct: 247 tttctctctgtggtccctgacaaaaaggaaaaatcacggcttttcttgaagaggaataaa 306
Query: 301 cggaaatatgcaagcattgatgatgaacattcaagtcaggtcatggatggactacaagtc 360
| | |||||| | | | ||| | |||||| |||| ||||| |||||||||||
Sbjct: 307 catagatatgccggtagtagtga---attttcaagccaggctatggaaggactacaagtt 363
Query: 361 atcaatggtctggagtgtaagatagcttgcaattcgtccaaggtctcatacgttttagat 420
| |||||||||||||||||||||||||||| ||| || ||||| ||||| |||||||||
Sbjct: 364 tttaatggtctggagtgtaagatagcttgcagttcttctaaggtgtcatatgttttagat 423
Query: 421 actgaagac 429
|| ||||||
Sbjct: 424 acagaagac 432
>gnl|LJGI|FS338331 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 809
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 343 atggatggactacaagtcatcaatggtctggagtgtaagatagcttgcaattcgtccaag 402
||||| ||||||||| | | ||||||||||||||| |||||||||||| ||| || |||
Sbjct: 624 atggaaggactacaaatttttaatggtctggagtgtgagatagcttgcagttcttcgaag 683
Query: 403 gtctcatacgttttagatac 422
|| ||||| |||||||||||
Sbjct: 684 gtgtcatatgttttagatac 703
>gnl|LJGI|TC61778 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 1393
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 343 atggatggactacaagtcatcaatggtctggagtgtaagatagcttgcaattcgtccaag 402
||||| ||||||||| | | ||||||||||||||| |||||||||||| ||| || |||
Sbjct: 1083 atggaaggactacaaatttttaatggtctggagtgtgagatagcttgcagttcttcgaag 1142
Query: 403 gtctcatacgttttagatac 422
|| ||||| |||||||||||
Sbjct: 1143 gtgtcatatgttttagatac 1162