Miyakogusa Predicted Gene
- Lj0g3v0228419.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0228419.1 Non Chatacterized Hit- tr|I1M451|I1M451_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.11,0,helicase
superfamily c-terminal domain,Helicase, C-terminal; no
description,NULL; Helicase_C,Helicas,CUFF.14908.1
(483 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79927 similar to UniRef100_A7PX42 Cluster: Chromosome... 664 0.0
gnl|LJGI|TC80050 similar to UniRef100_A7R047 Cluster: Chromosome... 543 e-154
>gnl|LJGI|TC79927 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 638
Score = 664 bits (335), Expect = 0.0
Identities = 338/339 (99%)
Strand = Plus / Plus
Query: 145 gccattaaaagatttaatgatgatccagactgcagaatttttctcttgagtttgaaggcg 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccattaaaagatttaatgatgatccagactgcagaatttttctcttgagtttgaaggcg 60
Query: 205 gctggtgttgccctcaatttgactgtagcatctcatgttttcctcatggagccttggtgg 264
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctggtgttgccatcaatttgactgtagcatctcatgttttcctcatggagccttggtgg 120
Query: 265 aacccaggcgtagagcaacaggctcaggatagaattcaccgaatagggcaaaataaacct 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacccaggcgtagagcaacaggctcaggatagaattcaccgaatagggcaaaataaacct 180
Query: 325 ataagagttgtgaagtttatcacagagaacaccatcgaggagaggattctgaagctgcag 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataagagttgtgaagtttatcacagagaacaccatcgaggagaggattctgaagctgcag 240
Query: 385 cagcagaaggaagcagtgtctgaagggctaatagacggctcttctgaagctttggggaga 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagcagaaggaagcagtgtctgaagggctaatagacggctcttctgaagctttggggaga 300
Query: 445 ttgaaactgtccgagatgataaacctgtttggattttaa 483
|||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgaaactgtccgagatgataaacctgtttggattttaa 339
>gnl|LJGI|TC80050 similar to UniRef100_A7R047 Cluster: Chromosome chr10 scaffold_297,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_297, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 666
Score = 543 bits (274), Expect = e-154
Identities = 331/346 (95%), Gaps = 3/346 (0%)
Strand = Plus / Plus
Query: 141 tgctgccattaaaagatttaatgatgatccagactgcagaatttttctcttgagtttgaa 200
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 7 tgctgccattaaaagatttaatgatgatccagactgcaaattttttctcttgagtttgaa 66
Query: 201 ggcggctggtgttgccctcaatttgactgtagcatctcatgttttcctcatggagccttg 260
||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 67 ggcagctggtgtggccctcaatttgactgtagcatcacatgttttcctcatggagccttg 126
Query: 261 gtggaacccaggcgtagagcaacaggctcaggatagaattcaccgaatagggcaaaataa 320
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gtggaacccagacgcagagcaacaggctcaggatagaattcaccgaatagggcaaaataa 186
Query: 321 acctataagagttgtgaagtttatcacagagaacaccatcgaggagaggattctgaagct 380
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 187 acctataagagttgtgaagtttatcacagagaacaccgtcgaggagaggattctggagct 246
Query: 381 gcagca-gcagaaggaagca-gtgtctgaagggctaat-agacggctcttctgaagcttt 437
|||||| | ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 247 gcagcacgaagaaggaagcacgtgtctgaagggctaataagacggctcttctgaagcttt 306
Query: 438 ggggagattgaaactgtccgagatgataaacctgtttggattttaa 483
|||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 307 ggggagattgaaaccgtccgagatgatgaacctgtttggattttaa 352