Miyakogusa Predicted Gene

Lj0g3v0228349.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0228349.1 tr|F2D3M6|F2D3M6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,32.26,3.6,seg,NULL,36899_g.1
         (370 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58909 homologue to UniRef100_A6NIL2 Cluster: Uncharac...   440   e-123

>gnl|LJGI|TC58909 homologue to UniRef100_A6NIL2 Cluster: Uncharacterized protein
           FAM22G; n=1; Homo sapiens|Rep: Uncharacterized protein
           FAM22G - Homo sapiens (Human), partial (4%)
          Length = 1061

 Score =  440 bits (222), Expect = e-123
 Identities = 247/253 (97%), Gaps = 3/253 (1%)
 Strand = Plus / Minus

                                                                       
Query: 121 gaaaggctcactgactggaacaggccaaaaaacagaaacaagagacctcaaacacagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaaggctcactgactggaacaggccaaaaaacagaaacaagagacctcaaacacagaaa 265

                                                                       
Query: 181 cgaaccacagaagaggaatcctggaataaaaacaagcaaacccagaaaaattgtcagcgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgaaccacagaagaggaatcctggaataaaaacaagcaaacccagaaaaattgtcagcgg 205

                                                                       
Query: 241 cgaccg--gcggc-gacggcagcggctgatcacgacacagtggtggcagcagcggactat 297
           ||||||  ||||| | |||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cgaccgcagcggctggcggtggcggctgatcacgacacagtggtggcagcagcggactat 145

                                                                       
Query: 298 ggtagcagcagccaacagcagtggtggcggccggtggttgcttccggaattctaactggt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ggtagcagcagccaacagcagtggtggcggccggtggttgcttccggaattctaactggt 85

                        
Query: 358 aaaaataagggtt 370
           |||||||||||||
Sbjct: 84  aaaaataagggtt 72



 Score =  113 bits (57), Expect = 8e-25
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                    
Query: 1   atgagactcttcttctcacccttgggagacttatccttcagcaaatcctccatgaag 57
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgagactcttcttctcacccttgggagacttatccttcagcaaatcctccatgaag 388