Miyakogusa Predicted Gene

Lj0g3v0228259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0228259.1 tr|Q8GW36|Q8GW36_ARATH At3g13950 OS=Arabidopsis
thaliana GN=At3g13950/MDC16_7 PE=2 SV=1,47.62,3e-19,seg,NULL; PGG,PGG
domain,CUFF.14897.1
         (615 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65140 weakly similar to UniRef100_Q9LVK5 Cluster: Ara...   440   e-123

>gnl|LJGI|TC65140 weakly similar to UniRef100_Q9LVK5 Cluster: Arabidopsis thaliana
           genomic DNA, chromosome 3, P1 clone: MDC16; n=1;
           Arabidopsis thaliana|Rep: Arabidopsis thaliana genomic
           DNA, chromosome 3, P1 clone: MDC16 - Arabidopsis
           thaliana (Mouse-ear cress), partial (23%)
          Length = 629

 Score =  440 bits (222), Expect = e-123
 Identities = 222/222 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggagggaaggtcgctaccaacaagagcagagtctcagaatggagcatatcaaagaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 atggagggaaggtcgctaccaacaagagcagagtctcagaatggagcatatcaaagaaca 467

                                                                       
Query: 61  gaatcaaggtaccaaaactttaaggggaattggatggaagagatgcgaggttcccttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaatcaaggtaccaaaactttaaggggaattggatggaagagatgcgaggttcccttatg 407

                                                                       
Query: 121 gtggtagccacagttattgcaaccttaaccttccaaattgctataaacccaccaggaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtggtagccacagttattgcaaccttaaccttccaaattgctataaacccaccaggaggt 347

                                                     
Query: 181 gtttggcaaacagacacaaatagccagcaaggttgtgctcct 222
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gtttggcaaacagacacaaatagccagcaaggttgtgctcct 305