Miyakogusa Predicted Gene
- Lj0g3v0228219.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0228219.1 Non Chatacterized Hit- tr|I1L9W8|I1L9W8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45063
PE,82.17,0,seg,NULL; Peptidase_S41,Interphotoreceptor retinol-binding;
PDZ_2,PDZ domain; ClpP/crotonase,NULL; P,CUFF.14892.1
(1365 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593599 similar to UniRef100_A7PWB0 Cluster: Chromosom... 626 e-179
gnl|LJGI|BP066840 similar to UniRef100_A7PWA9 Cluster: Chromosom... 131 1e-29
>gnl|LJGI|DC593599 similar to UniRef100_A7PWB0 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 505
Score = 626 bits (316), Expect = e-179
Identities = 326/328 (99%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 1 atgaagaatctttgtcacaatttggacattaaagctgcaattccaggtaaagtggcgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgaagaatctttgtcacaatttggacattaaagctgcaattccaggtaaagtggcgaaa 145
Query: 61 cccatttcggtagcagcgtttcctcgtaggttgtggttcccgacatggacacggcagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 cccatttcggtagcagcgtttcctcgtaggttgtggttcccgacatggacacggcagagg 205
Query: 121 aaggtgtcggtgtcggtgtcggtgtcgtcgattgaggaagagaagaaggtaaagatgcag 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 206 aaggtgtcggtgtcggtgtcggtgtcgtcgattgaggaagagaagaaggtgaagatgcag 265
Query: 181 tgccgtgagtggattgaaagtgcagccaaaagtgcttttggatttggcgtttcagcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgccgtgagtggattgaaagtgcagccaaaagtgcttttggatttggcgtttcagcttct 325
Query: 241 atcttcttctctg-ttttttgccacgcgccgccgcaggctctcgctcagtcactcaccgt 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atcttcttctctgtttttttgccacgcgccgccgcaggctctcgctcagtcactcaccgt 385
Query: 300 cgcttttcccgtttcacgggcaccagag 327
||||||||||||||||||||||||||||
Sbjct: 386 cgcttttcccgtttcacgggcaccagag 413
Score = 186 bits (94), Expect = 2e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 408 agattgggatatgaagttgcagcaaacaatggtggaaatgtttcccctgaactcagctga 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agattgggatatgaagttgcagcaaacaatggtggaaatgtttcccctgaactcagctga 471
Query: 468 tgcagcctacacaaaagtcagtggaatggtttct 501
||||||||||||||||||||||||||||||||||
Sbjct: 472 tgcagcctacacaaaagtcagtggaatggtttct 505
>gnl|LJGI|BP066840 similar to UniRef100_A7PWA9 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 471
Score = 131 bits (66), Expect = 1e-29
Identities = 80/82 (97%), Gaps = 2/82 (2%)
Strand = Plus / Minus
Query: 1285 cagagtgtgactcagcttcatgatgggtcagccctgtttgttacagtagcaaaatatctc 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cagagtgtgactcagcttcatgatgggtcagccctgtttgttacagtagcaaaatatctc 400
Query: 1345 tcaccagccaaac-atgacata 1365
||| ||||||||| ||||||||
Sbjct: 399 tca-cagccaaactatgacata 379