Miyakogusa Predicted Gene

Lj0g3v0227689.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0227689.1 tr|I1LJW2|I1LJW2_SOYBN Nucleolar GTP-binding
protein 1 OS=Glycine max GN=Gma.3499 PE=3
SV=1,45.16,0.00000000001,seg,NULL,CUFF.14844.1
         (281 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70997 similar to UniRef100_A7QNT3 Cluster: Chromosome...    74   5e-13

>gnl|LJGI|TC70997 similar to UniRef100_A7QNT3 Cluster: Chromosome undetermined
           scaffold_134, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_134,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (45%)
          Length = 1293

 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 117/143 (81%), Gaps = 3/143 (2%)
 Strand = Plus / Plus

                                                                       
Query: 2   tggaaagagaagaggggttaagacaggcagaagctgaagaaaatactgaaattgagatag 61
           |||||||||||||||||||||||| |||||||   || ||| ||  |||  |||||||||
Sbjct: 360 tggaaagagaagaggggttaagactggcagaa---gaggaagatgatgattttgagatag 416

                                                                       
Query: 62  ttggaactgaattgcaaccagaacaggaagcaactatagctgagactagtaaaaagagaa 121
            ||||||||  |||  |||||||||   ||||||| ||||||||| ||| |||| || ||
Sbjct: 417 atggaactggtttggcaccagaacaactagcaactttagctgagattaggaaaaggaaaa 476

                                  
Query: 122 gcttgctcatccaacagcttagg 144
             |||||||||||||||| ||||
Sbjct: 477 aattgctcatccaacagcatagg 499