Miyakogusa Predicted Gene

Lj0g3v0226459.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0226459.1 tr|D7LZN3|D7LZN3_ARALL Signal-responsive protein
OS=Arabidopsis lyrata subsp. lyrata GN=ATSR PE=4
SV,72.88,1e-18,THREONINE DEHYDRATASE-RELATED,NULL; SER/THR
DEHYDRATASE, TRP SYNTHASE,NULL; no description,NULL,CUFF.14812.1
         (191 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77505 similar to UniRef100_A7QIU2 Cluster: Chromosome...   379   e-105
gnl|LJGI|TC75499 similar to UniRef100_A7QIU2 Cluster: Chromosome...   192   5e-49

>gnl|LJGI|TC77505 similar to UniRef100_A7QIU2 Cluster: Chromosome chr2 scaffold_105,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_105, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 562

 Score =  379 bits (191), Expect = e-105
 Identities = 191/191 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagctgtgttttcaaattctgaaggtggttgtcgaaccaagtggagcaattggcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgaagctgtgttttcaaattctgaaggtggttgtcgaaccaagtggagcaattggcctt 240

                                                                       
Query: 61  gctgcggtactatcagattctttccagaaaaatcctgcttggaaggactgcaacaatatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctgcggtactatcagattctttccagaaaaatcctgcttggaaggactgcaacaatatc 300

                                                                       
Query: 121 ggtattgttgtttcaggaggcaacgttgatctaggcgtgctatgggattctttgaataaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtattgttgtttcaggaggcaacgttgatctaggcgtgctatgggattctttgaataaa 360

                      
Query: 181 gcaatatgaag 191
           |||||||||||
Sbjct: 361 gcaatatgaag 371


>gnl|LJGI|TC75499 similar to UniRef100_A7QIU2 Cluster: Chromosome chr2 scaffold_105,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_105, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (84%)
          Length = 976

 Score =  192 bits (97), Expect = 5e-49
 Identities = 166/189 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagctgtgttttcaaattctgaaggtggttgtcgaaccaagtggagcaattggcctt 60
           ||||| ||||||||| ||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 669 atgaaactgtgttttgaaattcttaaggttgttgtggaaccaagtggagcaattggcctt 728

                                                                       
Query: 61  gctgcggtactatcagattctttccagaaaaatcctgcttggaaggactgcaacaatatc 120
           ||||| || ||||| ||| | ||||||||||||||||| |||||||| |||||| |||| 
Sbjct: 729 gctgctgttctatccgataccttccagaaaaatcctgcatggaaggattgcaaccatatt 788

                                                                       
Query: 121 ggtattgttgtttcaggaggcaacgttgatctaggcgtgctatgggattctttgaataaa 180
           || ||||| |||||||||||||| |||||||| | |||||| ||||||||||| || |||
Sbjct: 789 ggaattgtagtttcaggaggcaatgttgatctggccgtgctttgggattcttttaacaaa 848

                    
Query: 181 gcaatatga 189
           |||| ||||
Sbjct: 849 gcaaaatga 857