Miyakogusa Predicted Gene
- Lj0g3v0226409.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0226409.1 Non Chatacterized Hit- tr|I1HH22|I1HH22_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,77.78,2e-18,Myb_DNA-bind_6,NULL;
Homeodomain-like,Homeodomain-like; SANT SWI3, ADA2, N-CoR and
TFIIIB'' DNA-bin,CUFF.14807.1
(363 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61813 similar to UniRef100_A7Q0S3 Cluster: Chromosome... 644 0.0
gnl|LJGI|FS342056 similar to UniRef100_A7Q0S3 Cluster: Chromosom... 638 0.0
gnl|LJGI|FS336955 similar to UniRef100_A7Q0S3 Cluster: Chromosom... 638 0.0
gnl|LJGI|TC67849 similar to UniRef100_A7Q0S3 Cluster: Chromosome... 343 5e-94
>gnl|LJGI|TC61813 similar to UniRef100_A7Q0S3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 913
Score = 644 bits (325), Expect = 0.0
Identities = 350/357 (98%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 400
Query: 61 aactataccattgggttcgtgttgtcaatggtgttccgcctacaggggattatttctttt 120
|||| ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||
Sbjct: 401 aactttaccattgggttcgtgtcgtcaatggtgttccccctacaggggattatt-ctttt 459
Query: 121 gccaagtataataagtctgttgacattatcagatacacagatgaggagtatgacaagcat 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gccaagtataacaagtctgttgacattatcagatacacagatgaggagtatgacaagcat 519
Query: 181 ttgacgaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttgaccaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 579
Query: 241 ttcgatctccgatttattgtaattgctgataggttcccttcatctcggactgtagaagaa 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 580 ttcgatctccgatttattgtaattgctgataggttcccatcatctcggactgtagaagaa 639
Query: 301 ttaaaggatcgatattatagtgtatctcgggctatattaattgcaagggctccatct 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttaaaggatcgatattatagtgtatctcgggctatattaattgcaagggctccatct 696
>gnl|LJGI|FS342056 similar to UniRef100_A7Q0S3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 744
Score = 638 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus
Query: 1 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 374
Query: 61 aactataccattgggttcgtgttgtcaatggtgttccgcctacaggggattatttctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aactataccattgggttcgtgttgtcaatggtgttccgcctacaggggattatttctttt 434
Query: 121 gccaagtataataagtctgttgacattatcagatacacagatgaggagtatgacaagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gccaagtataataagtctgttgacattatcagatacacagatgaggagtatgacaagcat 494
Query: 181 ttgacgaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttgacgaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 554
Query: 241 ttcgatctccgatttattgtaattgctgataggttcccttcatctcggactgtagaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttcgatctccgatttattgtaattgctgataggttcccttcatctcggactgtagaagaa 614
Query: 301 ttaaaggatcgatattatagtg 322
||||||||||||||||||||||
Sbjct: 615 ttaaaggatcgatattatagtg 636
>gnl|LJGI|FS336955 similar to UniRef100_A7Q0S3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 811
Score = 638 bits (322), Expect = 0.0
Identities = 322/322 (100%)
Strand = Plus / Plus
Query: 1 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 325
Query: 61 aactataccattgggttcgtgttgtcaatggtgttccgcctacaggggattatttctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aactataccattgggttcgtgttgtcaatggtgttccgcctacaggggattatttctttt 385
Query: 121 gccaagtataataagtctgttgacattatcagatacacagatgaggagtatgacaagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gccaagtataataagtctgttgacattatcagatacacagatgaggagtatgacaagcat 445
Query: 181 ttgacgaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgacgaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 505
Query: 241 ttcgatctccgatttattgtaattgctgataggttcccttcatctcggactgtagaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttcgatctccgatttattgtaattgctgataggttcccttcatctcggactgtagaagaa 565
Query: 301 ttaaaggatcgatattatagtg 322
||||||||||||||||||||||
Sbjct: 566 ttaaaggatcgatattatagtg 587
>gnl|LJGI|TC67849 similar to UniRef100_A7Q0S3 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 781
Score = 343 bits (173), Expect = 5e-94
Identities = 312/357 (87%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 1 atgaaaagatcacttggcaatggcttcctttcaccagttctgctcgtaaagataatcttc 60
|||||||| ||| ||||||||||||||| ||||| | |||||| ||||||||| ||||||
Sbjct: 334 atgaaaaggtcagttggcaatggcttccgttcacgaattctgcccgtaaagatgatcttc 393
Query: 61 aactataccattgggttcgtgttgtcaatggtgttccgcctacaggggattatttctttt 120
| || |||||||||||||| |||| ||||||| ||| || ||||||| |||| |||||
Sbjct: 394 acctttaccattgggttcgagttgcaaatggtgctccaccagcaggggaatatt-ctttt 452
Query: 121 gccaagtataataagtctgttgacattatcagatacacagatgaggagtatgacaagcat 180
||||||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 453 gccaagtataacaagtctgttgacattacaagatacactgatgaggagtatgaaaagcat 512
Query: 181 ttgacgaatccgatgtggaccaaggaggagacggatgaactgtttgacttgtgtgagagg 240
||| | |||| | ||||||||||||||||| ||| | || ||||| |||||||||||
Sbjct: 513 ttggcagatcctaaatggaccaaggaggagacagatcagctatttgagttgtgtgagaga 572
Query: 241 ttcgatctccgatttattgtaattgctgataggttcccttcatctcggactgtagaagaa 300
||| ||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||
Sbjct: 573 ttcaatctccgatttattgtaatagctgataggttcccgtcatctagaactgtagaagaa 632
Query: 301 ttaaaggatcgatattatagtgtatctcgggctatattaattgcaagggctccatct 357
|||||||| |||||||||||||||||||| |||||||||||||| ||| |||||||
Sbjct: 633 ttaaaggagcgatattatagtgtatctcgagctatattaattgctaggaatccatct 689