Miyakogusa Predicted Gene

Lj0g3v0225279.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0225279.1 Non Chatacterized Hit- tr|I1LXT4|I1LXT4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,94.44,0.0000000004,
,NODE_66895_length_108_cov_70.564812.path2.1
         (112 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77466 homologue to gb|AF036494.1|AF036494 Eucryphia l...   222   3e-58
gnl|LJGI|TC72820 UniRef100_Q82SX6 Cluster: Possible (AF025396) O...    52   7e-07

>gnl|LJGI|TC77466 homologue to gb|AF036494.1|AF036494 Eucryphia lucida large subunit
            26S ribosomal RNA gene, partial sequence, partial (57%)
          Length = 2455

 Score =  222 bits (112), Expect = 3e-58
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgctctcactcgaacccttcactaaagatcagggtcggtcggcggtgcaacccacaagg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 atgctctcactcgaacccttcactaaagatcagggtcggtcggcggtgcaacccacaagg 1278

                                                                
Query: 61   ggatcccaccaatcagcttccttgcgccttacgggtttactcgcccgttgac 112
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 ggatcccaccaatcagcttccttgcgccttacgggtttactcgcccgttgac 1226


>gnl|LJGI|TC72820 UniRef100_Q82SX6 Cluster: Possible (AF025396) ORF15x3 [Listonella
           anguillarum]; n=1; Nitrosomonas europaea|Rep: Possible
           (AF025396) ORF15x3 [Listonella anguillarum] -
           Nitrosomonas europaea, partial (7%)
          Length = 493

 Score = 52.0 bits (26), Expect = 7e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 75  agcttccttgcgccttacgggtttac 100
           ||||||||||||||||||||||||||
Sbjct: 26  agcttccttgcgccttacgggtttac 1