Miyakogusa Predicted Gene

Lj0g3v0225209.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0225209.1 Non Chatacterized Hit- tr|G7K117|G7K117_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,89.47,1.6,
,CUFF.14635.1
         (255 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71662 similar to UniRef100_A7PC94 Cluster: Chromosome...    86   1e-16
gnl|LJGI|TC61697 homologue to UniRef100_A7PC94 Cluster: Chromoso...    68   3e-11

>gnl|LJGI|TC71662 similar to UniRef100_A7PC94 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (76%)
          Length = 1359

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 62/67 (92%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 181 cagtttgtactgatggttgctgcaagttcagtgggggaggagctcctttaca-ggctgct 239
           ||||||||||||||||||||||||||||||||||| ||||||||| | |||| |||||| 
Sbjct: 646 cagtttgtactgatggttgctgcaagttcagtgggagaggagctcttctacagggctgcg 705

                  
Query: 240 gttcagg 246
           |||||||
Sbjct: 706 gttcagg 712


>gnl|LJGI|TC61697 homologue to UniRef100_A7PC94 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 761

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                     
Query: 190 ctgatggttgctgcaagttcagtgggggaggagctcctttaca-ggctgctgttcagg 246
           |||||||||||||||||||||||||| ||||||||| | |||| |||||| |||||||
Sbjct: 2   ctgatggttgctgcaagttcagtgggagaggagctcttctacagggctgcggttcagg 59