Miyakogusa Predicted Gene
- Lj0g3v0224509.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0224509.1 Non Chatacterized Hit- tr|B8B0L3|B8B0L3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,51.85,3e-17,FAR1,FAR1 DNA binding domain,CUFF.14608.1
(453 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74015 866 0.0
gnl|LJGI|BW617880 similar to UniRef100_Q7XCE8 Cluster: Expressed... 535 e-152
>gnl|LJGI|TC74015
Length = 1567
Score = 866 bits (437), Expect = 0.0
Identities = 449/453 (99%)
Strand = Plus / Plus
Query: 1 atggatgccgacgagcaactcgaatcatccacgacagccaaggacgccgacgagcaccgc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 50 atggatgccgacgagcaactcgaatcgtccacgacagccaaggacgccgacgagcaccgc 109
Query: 61 acatcacccacagtgatcatggataccgacgagcatctcaaatcactcacgacagccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 acatcacccacagtgatcatggataccgacgagcatctcaaatcactcacgacagccaag 169
Query: 121 gacgacaggcaccacatatcaatcacgaaagacactagaatgtcaaatgattttgttgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gacgacaggcaccacatatcaatcacgaaagacactagaatgtcaaatgattttgttgct 229
Query: 181 gcacaaagaacttcaaataaggatgatgaatggaagcctcaagtaggcctactattcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gcacaaagaacttcaaataaggatgatgaatggaagcctcaagtaggcctactattcaac 289
Query: 241 actttagaagagacatggaaactttggaatggttacggtggaaaaattggatttaatgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 actttagaagagacatggaaactttggaatggttacggtggaaaaattggatttaatgtt 349
Query: 301 cgaaagcagtattttaacaagaacaaagatggaatgatcttgactattagatatgtgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cgaaagcagtattttaacaagaacaaagatggaatgatcttgactattagatatgtgtgc 409
Query: 361 agcaaagaaggaattcgtaaacccgataaaagggattgcgtgacaactaagcatcggctt 420
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 410 agcaaagaaggaattcgtaaacccgataaaagggattgcttgacaactaacaatcggctt 469
Query: 421 gagacaagaaccaattgtcctgcaaggatatga 453
|||||||||||||||||||||||||||||||||
Sbjct: 470 gagacaagaaccaattgtcctgcaaggatatga 502
>gnl|LJGI|BW617880 similar to UniRef100_Q7XCE8 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (5%)
Length = 478
Score = 535 bits (270), Expect = e-152
Identities = 309/322 (95%)
Strand = Plus / Plus
Query: 129 gcaccacatatcaatcacgaaagacactagaatgtcaaatgattttgttgctgcacaaag 188
||||| || |||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 153 gcaccgcacatcaatcacggaagccactagaatgtcaaatgattttgttgctgcacaaag 212
Query: 189 aacttcaaataaggatgatgaatggaagcctcaagtaggcctactattcaacactttaga 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 213 aacttcaaataaggatgatgaatggaagcctcaagtaggcctactattcaacactttgga 272
Query: 249 agagacatggaaactttggaatggttacggtggaaaaattggatttaatgttcgaaagca 308
|||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 273 agaggcatggaaactttggaatggttacggtggaaaaaatggatttaatgttcggaagca 332
Query: 309 gtattttaacaagaacaaagatggaatgatcttgactattagatatgtgtgcagcaaaga 368
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 333 atattttaacaagaacaaagatggaatgatattgactactagatatgtgtgcagcaaaga 392
Query: 369 aggaattcgtaaacccgataaaagggattgcgtgacaactaagcatcggcttgagacaag 428
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 393 aggaattcgtaaacccgataaaagggattgcttgacaactaatcatcggcttgagacaag 452
Query: 429 aaccaattgtcctgcaaggata 450
||||||||||||||||||||||
Sbjct: 453 aaccaattgtcctgcaaggata 474
Score = 125 bits (63), Expect = 3e-28
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 1 atggatgccgacgagcaactcgaatcatccacgacagccaaggacgccgacgagcaccgc 60
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 atggatgccgatgagcaactcgaatcacccacgacagccaaggacgccgacgagcaccgt 120
Query: 61 acatcacccacagtgatcatggataccgacgagca 95
||||||||||| ||| |||||| ||||||||||
Sbjct: 121 acatcacccacggtggccatggacgccgacgagca 155
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/73 (86%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 52 gagcaccgcacatcacccacagtgatcatggataccgacgagcatctcaaatcactcacg 111
|||||||||||| |||||| ||| ||||||| |||| ||||| ||| |||||| ||||
Sbjct: 36 gagcaccgcaca--acccacggtggccatggatgccgatgagcaactcgaatcacccacg 93
Query: 112 acagccaaggacg 124
|||||||||||||
Sbjct: 94 acagccaaggacg 106
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 37 gccaaggacgccgacgagcaccgcacatca 66
|||| |||||||||||||||||||||||||
Sbjct: 136 gccatggacgccgacgagcaccgcacatca 165