Miyakogusa Predicted Gene
- Lj0g3v0224429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0224429.1 Non Chatacterized Hit- tr|D7UD68|D7UD68_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.11,0.000000000000004,seg,NULL; zinc finger binding to DNA
consensus sequenc,Zinc finger, GATA-type;
GATA_ZN_FINGER_2,Zinc,CUFF.14610.1
(1587 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62849 similar to UniRef100_A7R377 Cluster: Chromosome... 759 0.0
gnl|LJGI|TC58964 similar to UniRef100_A7R377 Cluster: Chromosome... 724 0.0
gnl|LJGI|TC60189 similar to UniRef100_A7R377 Cluster: Chromosome... 295 4e-79
gnl|LJGI|TC80041 weakly similar to UniRef100_A7R377 Cluster: Chr... 135 9e-31
gnl|LJGI|BI419096 UniRef100_A7PM80 Cluster: Chromosome chr14 sca... 111 1e-23
>gnl|LJGI|TC62849 similar to UniRef100_A7R377 Cluster: Chromosome undetermined
scaffold_489, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_489, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(13%)
Length = 779
Score = 759 bits (383), Expect = 0.0
Identities = 383/383 (100%)
Strand = Plus / Plus
Query: 1205 agaaaggtggaaaccaagctggaaaatgtattgatctgggatctactgctatggcatcaa 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaggtggaaaccaagctggaaaatgtattgatctgggatctactgctatggcatcaa 60
Query: 1265 gtaatgttgcaaatgtcaagagattgcggtacagccagaatcagaactttccagaattga 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtaatgttgcaaatgtcaagagattgcggtacagccagaatcagaactttccagaattga 120
Query: 1325 agacaatgaggagccccaagagggtgaccataaaggctagctgtgaaggcaaagaagttg 1384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacaatgaggagccccaagagggtgaccataaaggctagctgtgaaggcaaagaagttg 180
Query: 1385 cagaagaaggctctaactgcagtccaagaagcctatttgcattgccaggtgatggtagct 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagaagaaggctctaactgcagtccaagaagcctatttgcattgccaggtgatggtagct 240
Query: 1445 tgtgcatgctggattctttgaactttgttgctgagagttctgatcaggatttgctgctag 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtgcatgctggattctttgaactttgttgctgagagttctgatcaggatttgctgctag 300
Query: 1505 aggtgccatctaacagctcttttccacaagcagagctcctccacccaacctcaagctcct 1564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggtgccatctaacagctcttttccacaagcagagctcctccacccaacctcaagctcct 360
Query: 1565 ggtgtccatgccagcaccagtag 1587
|||||||||||||||||||||||
Sbjct: 361 ggtgtccatgccagcaccagtag 383
>gnl|LJGI|TC58964 similar to UniRef100_A7R377 Cluster: Chromosome undetermined
scaffold_489, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_489,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 829
Score = 724 bits (365), Expect = 0.0
Identities = 365/365 (100%)
Strand = Plus / Plus
Query: 1 atggggaagcaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atggggaagcaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 524
Query: 61 gggccacctgagaagccagtactatgcaacgcatgtggatctcgatggaggacaaaggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gggccacctgagaagccagtactatgcaacgcatgtggatctcgatggaggacaaaggga 584
Query: 121 acacttgcaaattatacccctttacattctcgggcagacaatgttgataatgacgatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acacttgcaaattatacccctttacattctcgggcagacaatgttgataatgacgatcaa 644
Query: 181 agggtttccaggctaaagaacatgtcattaaataagaacaaagaagtgaaatttgtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agggtttccaggctaaagaacatgtcattaaataagaacaaagaagtgaaatttgtgaaa 704
Query: 241 agaaagctgaaccatgataatgctgcatctggagggtttacccctgattattatcaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 agaaagctgaaccatgataatgctgcatctggagggtttacccctgattattatcaagga 764
Query: 301 ttccaaaagtttgtggatgaagatactagcaatagatcaagttcagggtcagccatctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ttccaaaagtttgtggatgaagatactagcaatagatcaagttcagggtcagccatctct 824
Query: 361 aactc 365
|||||
Sbjct: 825 aactc 829
>gnl|LJGI|TC60189 similar to UniRef100_A7R377 Cluster: Chromosome undetermined
scaffold_489, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_489,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 781
Score = 295 bits (149), Expect = 4e-79
Identities = 311/365 (85%)
Strand = Plus / Plus
Query: 1 atggggaagcaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 60
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atgggcaaacaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 476
Query: 61 gggccacctgagaagccagtactatgcaacgcatgtggatctcgatggaggacaaaggga 120
|| ||||| ||||||||| |||||||||| |||||||| || || |||||||||||||||
Sbjct: 477 ggaccaccggagaagccaatactatgcaatgcatgtgggtcgcggtggaggacaaaggga 536
Query: 121 acacttgcaaattatacccctttacattctcgggcagacaatgttgataatgacgatcaa 180
|| |||| ||||||||||||||||||| ||||| |||| | || |||| |||| ||||||
Sbjct: 537 actcttgtaaattatacccctttacatgctcggccagaaactgatgattatgaggatcaa 596
Query: 181 agggtttccaggctaaagaacatgtcattaaataagaacaaagaagtgaaatttgtgaaa 240
| ||||| ||| |||| | ||| || ||||||||||||||||| | |||| | |||
Sbjct: 597 aaggttttcagagtaaaaagcatatccttaaataagaacaaagaggggaaaccactcaaa 656
Query: 241 agaaagctgaaccatgataatgctgcatctggagggtttacccctgattattatcaagga 300
||||||| ||||||||| ||| | |||||||||| || | ||| |||| | || |||
Sbjct: 657 agaaagcagaaccatgacaatttagtatctggaggggttgcaccttattacaaccaggga 716
Query: 301 ttccaaaagtttgtggatgaagatactagcaatagatcaagttcagggtcagccatctct 360
|||| |||| |||| ||||||||||| |||||| ||||||||||||| ||||| ||||||
Sbjct: 717 ttcccaaaggttgtcgatgaagatacaagcaatcgatcaagttcaggatcagctatctct 776
Query: 361 aactc 365
|||||
Sbjct: 777 aactc 781
>gnl|LJGI|TC80041 weakly similar to UniRef100_A7R377 Cluster: Chromosome undetermined
scaffold_489, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_489, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(14%)
Length = 713
Score = 135 bits (68), Expect = 9e-31
Identities = 232/286 (81%), Gaps = 3/286 (1%)
Strand = Plus / Plus
Query: 1259 catcaagtaatgttgcaaatgtcaagagattgcggtacagccagaatcagaactttccag 1318
|||||| ||||||||| || |||||||| |||| | ||| |||||| ||||||||||
Sbjct: 24 catcaactaatgttgcgaacatcaagagagtgcgtgatagctggaatcaaaactttccag 83
Query: 1319 aattgaagac---aatgaggagccccaagagggtgaccataaaggctagctgtgaaggca 1375
| |||||| | |||||| | |||||| ||||||| || ||| ||| | ||||| ||||
Sbjct: 84 agttgaagccgataatgagaaaccccaaaagggtgatcacaaaagctggttgtgagggca 143
Query: 1376 aagaagttgcagaagaaggctctaactgcagtccaagaagcctatttgcattgccaggtg 1435
||||||||| |||||| ||| ||| | ||||||| |||||| ||| | ||||| |||
Sbjct: 144 aagaagttgtagaagatggcgctagcaatagtccaaaaagcctgtttcctttgcctcgtg 203
Query: 1436 atggtagcttgtgcatgctggattctttgaactttgttgctgagagttctgatcaggatt 1495
|| ||||| | | | ||||||||||| ||||||| || ||||||||||||||||||
Sbjct: 204 ctgctagctcgctcttcctggattctttaaactttgctgaagagagttctgatcaggatc 263
Query: 1496 tgctgctagaggtgccatctaacagctcttttccacaagcagagct 1541
| |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 264 tactgctagatgtgccatctaacagttcttttccacaggcagagct 309
>gnl|LJGI|BI419096 UniRef100_A7PM80 Cluster: Chromosome chr14 scaffold_21, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_21, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (52%)
Length = 537
Score = 111 bits (56), Expect = 1e-23
Identities = 146/176 (82%)
Strand = Plus / Minus
Query: 1366 tgtgaaggcaaagaagttgcagaagaaggctctaactgcagtccaagaagcctatttgca 1425
||||| ||||||||||||| |||||| ||| ||| | ||||||| |||||| ||| |
Sbjct: 243 tgtgagggcaaagaagttgtagaagatggcgctagcaatagtccaaaaagcctgtttcct 184
Query: 1426 ttgccaggtgatggtagcttgtgcatgctggattctttgaactttgttgctgagagttct 1485
||||| ||| || ||||| | | | ||||||||||| ||||||| || |||||||||
Sbjct: 183 ttgcctcgtgctgctagctcgctcttcctggattctttaaactttgctgaagagagttct 124
Query: 1486 gatcaggatttgctgctagaggtgccatctaacagctcttttccacaagcagagct 1541
||||||||| | |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 123 gatcaggatctactgctagatgtgccatctaacagttcttttccacaggcagagct 68