Miyakogusa Predicted Gene

Lj0g3v0224429.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0224429.1 Non Chatacterized Hit- tr|D7UD68|D7UD68_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.11,0.000000000000004,seg,NULL; zinc finger binding to DNA
consensus sequenc,Zinc finger, GATA-type;
GATA_ZN_FINGER_2,Zinc,CUFF.14610.1
         (1587 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62849 similar to UniRef100_A7R377 Cluster: Chromosome...   759   0.0  
gnl|LJGI|TC58964 similar to UniRef100_A7R377 Cluster: Chromosome...   724   0.0  
gnl|LJGI|TC60189 similar to UniRef100_A7R377 Cluster: Chromosome...   295   4e-79
gnl|LJGI|TC80041 weakly similar to UniRef100_A7R377 Cluster: Chr...   135   9e-31
gnl|LJGI|BI419096 UniRef100_A7PM80 Cluster: Chromosome chr14 sca...   111   1e-23

>gnl|LJGI|TC62849 similar to UniRef100_A7R377 Cluster: Chromosome undetermined
            scaffold_489, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_489, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (13%)
          Length = 779

 Score =  759 bits (383), Expect = 0.0
 Identities = 383/383 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1205 agaaaggtggaaaccaagctggaaaatgtattgatctgggatctactgctatggcatcaa 1264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agaaaggtggaaaccaagctggaaaatgtattgatctgggatctactgctatggcatcaa 60

                                                                        
Query: 1265 gtaatgttgcaaatgtcaagagattgcggtacagccagaatcagaactttccagaattga 1324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gtaatgttgcaaatgtcaagagattgcggtacagccagaatcagaactttccagaattga 120

                                                                        
Query: 1325 agacaatgaggagccccaagagggtgaccataaaggctagctgtgaaggcaaagaagttg 1384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agacaatgaggagccccaagagggtgaccataaaggctagctgtgaaggcaaagaagttg 180

                                                                        
Query: 1385 cagaagaaggctctaactgcagtccaagaagcctatttgcattgccaggtgatggtagct 1444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cagaagaaggctctaactgcagtccaagaagcctatttgcattgccaggtgatggtagct 240

                                                                        
Query: 1445 tgtgcatgctggattctttgaactttgttgctgagagttctgatcaggatttgctgctag 1504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgtgcatgctggattctttgaactttgttgctgagagttctgatcaggatttgctgctag 300

                                                                        
Query: 1505 aggtgccatctaacagctcttttccacaagcagagctcctccacccaacctcaagctcct 1564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aggtgccatctaacagctcttttccacaagcagagctcctccacccaacctcaagctcct 360

                                   
Query: 1565 ggtgtccatgccagcaccagtag 1587
            |||||||||||||||||||||||
Sbjct: 361  ggtgtccatgccagcaccagtag 383


>gnl|LJGI|TC58964 similar to UniRef100_A7R377 Cluster: Chromosome undetermined
           scaffold_489, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_489,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (22%)
          Length = 829

 Score =  724 bits (365), Expect = 0.0
 Identities = 365/365 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaagcaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atggggaagcaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 524

                                                                       
Query: 61  gggccacctgagaagccagtactatgcaacgcatgtggatctcgatggaggacaaaggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gggccacctgagaagccagtactatgcaacgcatgtggatctcgatggaggacaaaggga 584

                                                                       
Query: 121 acacttgcaaattatacccctttacattctcgggcagacaatgttgataatgacgatcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acacttgcaaattatacccctttacattctcgggcagacaatgttgataatgacgatcaa 644

                                                                       
Query: 181 agggtttccaggctaaagaacatgtcattaaataagaacaaagaagtgaaatttgtgaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agggtttccaggctaaagaacatgtcattaaataagaacaaagaagtgaaatttgtgaaa 704

                                                                       
Query: 241 agaaagctgaaccatgataatgctgcatctggagggtttacccctgattattatcaagga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 agaaagctgaaccatgataatgctgcatctggagggtttacccctgattattatcaagga 764

                                                                       
Query: 301 ttccaaaagtttgtggatgaagatactagcaatagatcaagttcagggtcagccatctct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ttccaaaagtttgtggatgaagatactagcaatagatcaagttcagggtcagccatctct 824

                
Query: 361 aactc 365
           |||||
Sbjct: 825 aactc 829


>gnl|LJGI|TC60189 similar to UniRef100_A7R377 Cluster: Chromosome undetermined
           scaffold_489, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_489,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (23%)
          Length = 781

 Score =  295 bits (149), Expect = 4e-79
 Identities = 311/365 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaagcaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 60
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 atgggcaaacaagggccttgctatcactgtggagttacaagcacaccactttggcgtaat 476

                                                                       
Query: 61  gggccacctgagaagccagtactatgcaacgcatgtggatctcgatggaggacaaaggga 120
           || ||||| ||||||||| |||||||||| |||||||| || || |||||||||||||||
Sbjct: 477 ggaccaccggagaagccaatactatgcaatgcatgtgggtcgcggtggaggacaaaggga 536

                                                                       
Query: 121 acacttgcaaattatacccctttacattctcgggcagacaatgttgataatgacgatcaa 180
           || |||| ||||||||||||||||||| ||||| |||| | || |||| |||| ||||||
Sbjct: 537 actcttgtaaattatacccctttacatgctcggccagaaactgatgattatgaggatcaa 596

                                                                       
Query: 181 agggtttccaggctaaagaacatgtcattaaataagaacaaagaagtgaaatttgtgaaa 240
           | ||||| |||  |||| | ||| || ||||||||||||||||| | ||||    | |||
Sbjct: 597 aaggttttcagagtaaaaagcatatccttaaataagaacaaagaggggaaaccactcaaa 656

                                                                       
Query: 241 agaaagctgaaccatgataatgctgcatctggagggtttacccctgattattatcaagga 300
           ||||||| ||||||||| |||   | |||||||||| || | ||| ||||  | || |||
Sbjct: 657 agaaagcagaaccatgacaatttagtatctggaggggttgcaccttattacaaccaggga 716

                                                                       
Query: 301 ttccaaaagtttgtggatgaagatactagcaatagatcaagttcagggtcagccatctct 360
           |||| |||| |||| ||||||||||| |||||| ||||||||||||| ||||| ||||||
Sbjct: 717 ttcccaaaggttgtcgatgaagatacaagcaatcgatcaagttcaggatcagctatctct 776

                
Query: 361 aactc 365
           |||||
Sbjct: 777 aactc 781


>gnl|LJGI|TC80041 weakly similar to UniRef100_A7R377 Cluster: Chromosome undetermined
            scaffold_489, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_489, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (14%)
          Length = 713

 Score =  135 bits (68), Expect = 9e-31
 Identities = 232/286 (81%), Gaps = 3/286 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1259 catcaagtaatgttgcaaatgtcaagagattgcggtacagccagaatcagaactttccag 1318
            |||||| ||||||||| ||  |||||||| ||||  | |||  |||||| ||||||||||
Sbjct: 24   catcaactaatgttgcgaacatcaagagagtgcgtgatagctggaatcaaaactttccag 83

                                                                        
Query: 1319 aattgaagac---aatgaggagccccaagagggtgaccataaaggctagctgtgaaggca 1375
            | |||||| |   |||||| | |||||| ||||||| || ||| ||| | ||||| ||||
Sbjct: 84   agttgaagccgataatgagaaaccccaaaagggtgatcacaaaagctggttgtgagggca 143

                                                                        
Query: 1376 aagaagttgcagaagaaggctctaactgcagtccaagaagcctatttgcattgccaggtg 1435
            ||||||||| |||||| ||| ||| |   ||||||| |||||| ||| | |||||  |||
Sbjct: 144  aagaagttgtagaagatggcgctagcaatagtccaaaaagcctgtttcctttgcctcgtg 203

                                                                        
Query: 1436 atggtagcttgtgcatgctggattctttgaactttgttgctgagagttctgatcaggatt 1495
             || ||||| |  | | ||||||||||| ||||||| ||  |||||||||||||||||| 
Sbjct: 204  ctgctagctcgctcttcctggattctttaaactttgctgaagagagttctgatcaggatc 263

                                                          
Query: 1496 tgctgctagaggtgccatctaacagctcttttccacaagcagagct 1541
            | |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 264  tactgctagatgtgccatctaacagttcttttccacaggcagagct 309


>gnl|LJGI|BI419096 UniRef100_A7PM80 Cluster: Chromosome chr14 scaffold_21, whole genome
            shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
            chr14 scaffold_21, whole genome shotgun sequence - Vitis
            vinifera (Grape), partial (52%)
          Length = 537

 Score =  111 bits (56), Expect = 1e-23
 Identities = 146/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 1366 tgtgaaggcaaagaagttgcagaagaaggctctaactgcagtccaagaagcctatttgca 1425
            ||||| ||||||||||||| |||||| ||| ||| |   ||||||| |||||| ||| | 
Sbjct: 243  tgtgagggcaaagaagttgtagaagatggcgctagcaatagtccaaaaagcctgtttcct 184

                                                                        
Query: 1426 ttgccaggtgatggtagcttgtgcatgctggattctttgaactttgttgctgagagttct 1485
            |||||  ||| || ||||| |  | | ||||||||||| ||||||| ||  |||||||||
Sbjct: 183  ttgcctcgtgctgctagctcgctcttcctggattctttaaactttgctgaagagagttct 124

                                                                    
Query: 1486 gatcaggatttgctgctagaggtgccatctaacagctcttttccacaagcagagct 1541
            ||||||||| | |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 123  gatcaggatctactgctagatgtgccatctaacagttcttttccacaggcagagct 68