Miyakogusa Predicted Gene

Lj0g3v0224419.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0224419.1 Non Chatacterized Hit- tr|G7J740|G7J740_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,26.77,0.00001,seg,NULL,CUFF.14600.1
         (979 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72225 similar to UniRef100_Q2US52 Cluster: DNA mismat...   944   0.0  

>gnl|LJGI|TC72225 similar to UniRef100_Q2US52 Cluster: DNA mismatch repair enzyme;
           n=1; Aspergillus oryzae|Rep: DNA mismatch repair enzyme
           - Aspergillus oryzae, partial (8%)
          Length = 543

 Score =  944 bits (476), Expect = 0.0
 Identities = 476/476 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaatcgccgccatacgacaccggccttccggttgcctccaccgctatcgtaatggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  atggaatcgccgccatacgacaccggccttccggttgcctccaccgctatcgtaatggtg 127

                                                                       
Query: 61  acgccgccggatacccaggatgacactcaagacggcgctcaagacgttttccacactccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acgccgccggatacccaggatgacactcaagacggcgctcaagacgttttccacactccg 187

                                                                       
Query: 121 cgtgaggactcctcgctcacctcgtcagacaaccagcaaccgacggtgaccgtcgacttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cgtgaggactcctcgctcacctcgtcagacaaccagcaaccgacggtgaccgtcgacttt 247

                                                                       
Query: 181 ggcgtcgtccactgctcggtcagcaaggtcttcgattctggaacccaggggttcgttgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggcgtcgtccactgctcggtcagcaaggtcttcgattctggaacccaggggttcgttgat 307

                                                                       
Query: 241 ttaggtgggtttccagatgagtcagagttcatggatttgggaaaagactctggattaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttaggtgggtttccagatgagtcagagttcatggatttgggaaaagactctggattaggg 367

                                                                       
Query: 301 tttcccgaagccgccgacgagatctcacctggatccggaggagatggtatgggcgagatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tttcccgaagccgccgacgagatctcacctggatccggaggagatggtatgggcgagatt 427

                                                                       
Query: 361 cctggaattcaggctgatcaatttggggtttctgatgcagatgcagaaaatcaggtttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cctggaattcaggctgatcaatttggggtttctgatgcagatgcagaaaatcaggtttct 487

                                                                   
Query: 421 gatgatgctgatgcaaaaaatcaggtttctggtgatgctgatgctgaaaatcccag 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gatgatgctgatgcaaaaaatcaggtttctggtgatgctgatgctgaaaatcccag 543