Miyakogusa Predicted Gene
- Lj0g3v0224049.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0224049.1 Non Chatacterized Hit- tr|I3T3F4|I3T3F4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,43.59,0.23,seg,NULL,CUFF.14575.1
(181 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV421795 weakly similar to UniRef100_A7R2K2 Cluster: Ch... 325 5e-89
gnl|LJGI|FS336552 weakly similar to UniRef100_A7PJ25 Cluster: Ch... 226 4e-59
gnl|LJGI|AV410889 similar to UniRef100_A7PJ25 Cluster: Chromosom... 212 5e-55
>gnl|LJGI|AV421795 weakly similar to UniRef100_A7R2K2 Cluster: Chromosome chr10
scaffold_433, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_433, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 267
Score = 325 bits (164), Expect = 5e-89
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 18 atcaaaatggaaccttaccaacacacttcgtctcttctcttcttcatcttctccaaccga 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atcaaaatggaaccttaccaacacacttcgtctcttctcttcttcatcttctccaaccga 63
Query: 78 ttccctcttcttacgaatttccagatccggcgaccgtgccatccccatgactcctctcct 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttccctcttcttacgaatttccagatccggcgaccgtgccatccccatgactcctctcct 123
Query: 138 caatcaatggcttcaagagggcaaactcatcaactactctgagc 181
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 caatcaatggcttcaagagggcaaactcatcaactactctgagc 167
>gnl|LJGI|FS336552 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 833
Score = 226 bits (114), Expect = 4e-59
Identities = 156/170 (91%)
Strand = Plus / Plus
Query: 2 tgatgaatcgcattgcatcaaaatggaaccttaccaacacacttcgtctcttctcttctt 61
||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||
Sbjct: 61 tgatgaatcgcattgcatcgaaatggaaccttaacaacacccttcgtctcttctcttctt 120
Query: 62 catcttctccaaccgattccctcttcttacgaatttccagatccggcgaccgtgccatcc 121
| |||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 121 cttcttctccgaccgattccctcttcttacgaatttccaggtccggagaccctgccatct 180
Query: 122 ccatgactcctctcctcaatcaatggcttcaagagggcaaactcatcaac 171
|||| ||||||||||||||||||||| || ||||||||| || |||||||
Sbjct: 181 ccatcactcctctcctcaatcaatgggttgaagagggcagacccatcaac 230
>gnl|LJGI|AV410889 similar to UniRef100_A7PJ25 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 436
Score = 212 bits (107), Expect = 5e-55
Identities = 155/171 (90%)
Strand = Plus / Plus
Query: 1 atgatgaatcgcattgcatcaaaatggaaccttaccaacacacttcgtctcttctcttct 60
|||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||
Sbjct: 88 atgatgaaccgcattgcatcaaaattgaaccttaacaacacccttcgtctcttctcttct 147
Query: 61 tcatcttctccaaccgattccctcttcttacgaatttccagatccggcgaccgtgccatc 120
| |||||||||| |||| ||||||||||||||||||||||| |||| |||| |||||||
Sbjct: 148 tattcttctccaatcgataccctcttcttacgaatttccagaaccggagaccctgccatc 207
Query: 121 cccatgactcctctcctcaatcaatggcttcaagagggcaaactcatcaac 171
||| | ||||||||||||||||||||| |||||||||||| || |||||||
Sbjct: 208 cccgttactcctctcctcaatcaatgggttcaagagggcagacccatcaac 258