Miyakogusa Predicted Gene
- Lj0g3v0223529.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0223529.1 tr|A9RVE0|A9RVE0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,24.23,1e-18,seg,NULL; Mitochondrial termination factor
repeats,Mitochodrial transcription termination factor-rel,CUFF.14524.1
(962 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64463 similar to UniRef100_A7P8U4 Cluster: Chromosome... 1899 0.0
>gnl|LJGI|TC64463 similar to UniRef100_A7P8U4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (96%)
Length = 1221
Score = 1899 bits (958), Expect = 0.0
Identities = 961/962 (99%)
Strand = Plus / Plus
Query: 1 atggaaatctctagcagccataacagcagtagtagcatgatgtggtttttcaaggacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atggaaatctctagcagccataacagcagtagtagcatgatgtggtttttcaaggacaga 157
Query: 61 gggtttgatgataacagcatacaaggcatgttccgaaaatgcaagcgcctcgaggttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gggtttgatgataacagcatacaaggcatgttccgaaaatgcaagcgcctcgaggttgtg 217
Query: 121 catcaggagaaagccaatgagaattgggagtatttgagaagcattggaattcaagaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 catcaggagaaagccaatgagaattgggagtatttgagaagcattggaattcaagaaagg 277
Query: 181 aaattgccctcaattgtttcgaaatgccctaagattctcgcgttgggtctcaatgagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aaattgccctcaattgtttcgaaatgccctaagattctcgcgttgggtctcaatgagaag 337
Query: 241 attgtgcccatggttgagtgtctcaagacactaggtacaaaaccccatgaagttgcctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 attgtgcccatggttgagtgtctcaagacactaggtacaaaaccccatgaagttgcctct 397
Query: 301 gccatagccaagttccctcacatactctctcacagtgtggaggagaagctttgtcccctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gccatagccaagttccctcacatactctctcacagtgtggaggagaagctttgtcccctt 457
Query: 361 ttggcattctttcaggcgcttggcgtgcccgaaaagcaaatcggtaaaatgatactgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttggcattctttcaggcgcttggcgtgcccgaaaagcaaatcggtaaaatgatactgctg 517
Query: 421 aaccctagacttatcagctacagcattgaaacaaagatggcagaaattgtggacttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaccctagacttatcagctacagcattgaaacaaagatggcagaaattgtggacttcctt 577
Query: 481 gctggccttggtctcaataaagatggaatgattggaaaagttttagtcaaggacccgtat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gctggccttggtctcaataaagatggaatgattggaaaagttttagtcaaggacccgtat 637
Query: 541 attatgggttatagtgtcgagaaaaggctcgaccctacttcacagtttctgaagtcaatt 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 638 attatgggttatagtgtcgagaaaaggctcggccctacttcacagtttctgaagtcaatt 697
Query: 601 ggtctggctgagaaggatcttcaagtggtggctatgaacttcccatcaattttgagtaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ggtctggctgagaaggatcttcaagtggtggctatgaacttcccatcaattttgagtaga 757
Query: 661 gatgtgaacaagcttttggttcccaatcacgcttatttaaagaaatgtggatttcaagac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gatgtgaacaagcttttggttcccaatcacgcttatttaaagaaatgtggatttcaagac 817
Query: 721 agacagattgtcgatttggtggttggatttcctcctatcctgatcaagagcatccagaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 agacagattgtcgatttggtggttggatttcctcctatcctgatcaagagcatccagaat 877
Query: 781 tctttggaaccgaggatcaagttcttagtagatgtaatggggagacaagttgatgaagtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 tctttggaaccgaggatcaagttcttagtagatgtaatggggagacaagttgatgaagtc 937
Query: 841 gttgattacccttgcttcttccggcatggtctaaagaaaaaattacaattgcggcacaag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 gttgattacccttgcttcttccggcatggtctaaagaaaaaattacaattgcggcacaag 997
Query: 901 tttctgaagcagaggaatttaagttgtagcttgagtgaaatgctggactgtaatgagaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 tttctgaagcagaggaatttaagttgtagcttgagtgaaatgctggactgtaatgagaag 1057
Query: 961 aa 962
||
Sbjct: 1058 aa 1059