Miyakogusa Predicted Gene

Lj0g3v0223509.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0223509.1 Non Chatacterized Hit- tr|D8RUP9|D8RUP9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,48.86,1e-17,seg,NULL,CUFF.14532.1
         (333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69877 similar to UniRef100_A7P3M6 Cluster: Chromosome...   490   e-138

>gnl|LJGI|TC69877 similar to UniRef100_A7P3M6 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 567

 Score =  490 bits (247), Expect = e-138
 Identities = 247/247 (100%)
 Strand = Plus / Plus

                                                                       
Query: 87  tgggattcactctcagcaatcagcaaagttgcaagagattgttgaatttattcaatctca 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgggattcactctcagcaatcagcaaagttgcaagagattgttgaatttattcaatctca 60

                                                                       
Query: 147 gggaggtagctcttcttcagaatcctcaccaagtacgggagtctctccaattgaaggtgt 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gggaggtagctcttcttcagaatcctcaccaagtacgggagtctctccaattgaaggtgt 120

                                                                       
Query: 207 tattgaagagatgcaatcaaggattagaaggcttgaaaagtggcttgctataaatacggt 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgaagagatgcaatcaaggattagaaggcttgaaaagtggcttgctataaatacggt 180

                                                                       
Query: 267 tctatggacatttctgatgtctgcccttgttggttattcactgtatcaaaggaggcgtca 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctatggacatttctgatgtctgcccttgttggttattcactgtatcaaaggaggcgtca 240

                  
Query: 327 atgatgg 333
           |||||||
Sbjct: 241 atgatgg 247