Miyakogusa Predicted Gene

Lj0g3v0223199.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0223199.3 tr|A4RUK5|A4RUK5_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_30653,34.48,2e-18,Pseudouridine synthase,Pseudouridine
synthase, catalytic domain; SUBFAMILY NOT NAMED,NULL; RNA
PSEUD,CUFF.15297.3
         (873 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595398 similar to UniRef100_A7QUL6 Cluster: Chromosom...   373   e-102

>gnl|LJGI|BW595398 similar to UniRef100_A7QUL6 Cluster: Chromosome chr10 scaffold_179,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_179, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 484

 Score =  373 bits (188), Expect = e-102
 Identities = 377/441 (85%), Gaps = 18/441 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgttctccggcggctgccggagcttcaccgcgcctgctgtttcgcgcgcacttcgc 60
           ||||| ||| |||||| ||| ||||| ||| ||| |||| |||| |||||||||||||||
Sbjct: 57  atgttcttcgccggcgactgtcggagtttcgccgtgcctcctgtctcgcgcgcacttcgc 116

                                                                       
Query: 61  aattcgcttaccaagcacctcaacaagcacgcgttgagttggcgccatcggagctcacat 120
           ||||||||            ||||||||||||||| |||||||||  |||||||||||| 
Sbjct: 117 aattcgct------------caacaagcacgcgttcagttggcgctgtcggagctcacac 164

                                                                       
Query: 121 agtagtagtaacgctgcactcgccggagaaactgaatcctccacaac---cgacgccgga 177
            ||||||   || ||||| || |||||||| ||| | |||||||||    ||||||||||
Sbjct: 165 ggtagta---accctgcaatcaccggagaatctgtaacctccacaattgacgacgccgga 221

                                                                       
Query: 178 aacttaccgtcctcctcctctccttatcacagctacccgaagtatgatcggttgcttcca 237
           |||||||| ||| |||| ||  | |   | |||||||||||||||||||| |||||||||
Sbjct: 222 aacttaccttccgcctcttcctcctccaatagctacccgaagtatgatcgattgcttcca 281

                                                                       
Query: 238 tgtccactgcacaaatctccaccaagaatcgaacacttggttgtatcagaaggaggacct 297
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 282 tgtccactgcacaaatctccaccaagaatcgaacacttggttgtttcagaaggaggacct 341

                                                                       
Query: 298 gtcttggagtatatttgcaggtcactggatcttcatcctctgtttgttgaagatctgatt 357
           || |||||||||||||||| |||||||||||||| |||||| ||||||| |||| |||| 
Sbjct: 342 gtattggagtatatttgcaagtcactggatcttcctcctctttttgttgcagatttgata 401

                                                                       
Query: 358 caatttggagctgtatactatgctcttgtttgccctcaccctcctcctaatgctacacca 417
           ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||| |||
Sbjct: 402 caatttggagctgtatactatgctcttgttccccctcaacctcctcctagtgctactcca 461

                                
Query: 418 gagcaactgaggatattcaaa 438
           |||||| ||||||||||||||
Sbjct: 462 gagcaaatgaggatattcaaa 482