Miyakogusa Predicted Gene
- Lj0g3v0222689.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0222689.1 Non Chatacterized Hit- tr|I1NH04|I1NH04_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41913
PE,77.79,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ABC_TRANSPORTER_1,ABC transporter, conserved site; ,CUFF.14459.1
(2733 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromoso... 301 1e-80
gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch... 295 7e-79
gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosom... 250 4e-65
gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosom... 182 8e-45
>gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 688
Score = 301 bits (152), Expect = 1e-80
Identities = 286/330 (86%), Gaps = 3/330 (0%)
Strand = Plus / Plus
Query: 2372 tatcgcaacactctgatcaagaaatatgggaggttctcggaaagtgtcaattgcgagagg 2431
|||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |
Sbjct: 1 tatctcaacactctgatcaagaaatatgggaggttctgggaaagtgtcaattgcaagaag 60
Query: 2432 ctgtcaaagataaag---gtggcttagacacttcagttgttgaagatggatcaaattgga 2488
||||| |||| |||| | || |||||| | ||||||||||||||||| |||| ||||
Sbjct: 61 ctgtccaagagaaagaagggggattagactcctcagttgttgaagatggggcaaactgga 120
Query: 2489 gcaccggacaaaggcaattattctgtttgggacgtgttcttttgaggaggagtaggatat 2548
||| ||||||||||| |||||||||||||| || | || | ||||| ||||||||||
Sbjct: 121 gcatgggacaaaggcagttattctgtttggggcgcgccctcctaaggagaagtaggatat 180
Query: 2549 tagtgcttgatgaagcaactgcatcaatcgataatgcaactgatttgattctgcagaaaa 2608
| ||||| |||||||| ||||| |||||||||||||| |||||||| ||||| |||||||
Sbjct: 181 tggtgctcgatgaagcgactgcttcaatcgataatgcgactgatttaattctacagaaaa 240
Query: 2609 ccatcaagactgaatttgcagattgtacggtaattaccgtagcccacaggataccaactg 2668
|||| | |||||| |||||||||||||| |||||||| || || |||||||| |||||||
Sbjct: 241 ccattaggactgagtttgcagattgtacagtaattacagttgctcacaggattccaactg 300
Query: 2669 tgatgaattgcactatggttcttgccatca 2698
||||| ||||||||| ||||||||||||||
Sbjct: 301 tgatggattgcactaaggttcttgccatca 330
>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 557
Score = 295 bits (149), Expect = 7e-79
Identities = 194/209 (92%)
Strand = Plus / Plus
Query: 835 ttgatgtcagatggaaaatccctacaagctgctccttatcacgatctattgacctcaagc 894
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 345 ttgatgtcaggtggaaaatccctacaagctgctccttatcaccatctattgacctcaagc 404
Query: 895 caagaatttcaggacctagtcaatgctcacaaagagactgctagttctgaccggcttgta 954
|||| ||||||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 405 caaggatttcaggatctagtcaatgctcacaaagaaactgctggttctgaccggcttgta 464
Query: 955 gatttcacttcttcccagagacattcaaattctggtagagaaattatacaacctttcaaa 1014
||| | |||||||||||||||| |||||||||||||||||| |||||| || ||| ||||
Sbjct: 465 gatgttacttcttcccagagaccttcaaattctggtagagagattataaaatcttccaaa 524
Query: 1015 cagaagcagtataaagaattaaatggtga 1043
|||||||||| ||||| ||||||||||||
Sbjct: 525 cagaagcagtttaaagcattaaatggtga 553
>gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(9%)
Length = 733
Score = 250 bits (126), Expect = 4e-65
Identities = 204/230 (88%)
Strand = Plus / Plus
Query: 2462 cagttgttgaagatggatcaaattggagcaccggacaaaggcaattattctgtttgggac 2521
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
Sbjct: 240 cagttgttgaagatggatcaaactggagcatgggacaaaggcaattattctgtttggggc 299
Query: 2522 gtgttcttttgaggaggagtaggatattagtgcttgatgaagcaactgcatcaatcgata 2581
| | |||||||| || ||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 300 gcgcacttttgagaagaagtaggatattggtgctggatgaagcaactgcatcgatcgata 359
Query: 2582 atgcaactgatttgattctgcagaaaaccatcaagactgaatttgcagattgtacggtaa 2641
|||||||||||||||||||||| |||||||| | |||||| ||||||||||| || || |
Sbjct: 360 atgcaactgatttgattctgcaaaaaaccattaggactgagtttgcagattgcacagtga 419
Query: 2642 ttaccgtagcccacaggataccaactgtgatgaattgcactatggttctt 2691
| || | || |||||||||||||| |||||| |||||||||||||||||
Sbjct: 420 tcacagctgcacacaggataccaacagtgatggattgcactatggttctt 469
>gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 209
Score = 182 bits (92), Expect = 8e-45
Identities = 153/174 (87%)
Strand = Plus / Plus
Query: 579 gtttccccatggtgacctcactgaaataggcgagagaggagtaaacctgagcggaggtca 638
|||||||||||||||||||||||||||||| || |||||||||||||| || ||||| ||
Sbjct: 3 gtttccccatggtgacctcactgaaataggtgaaagaggagtaaacctcagtggaggaca 62
Query: 639 gaaacagcgaattcaactagcccgtgctctttatcagaatgctgatgtatatatcctcga 698
|| |||||| ||||||| ||||||||||||||||| ||||||||||||||| | | ||
Sbjct: 63 aaagcagcgagttcaactcgcccgtgctctttatcaaaatgctgatgtatatcttttgga 122
Query: 699 tgatccattcagtgctgttgatgcacacactgccacaaatttgttcaataaata 752
||||||| ||| |||||||||||| || ||||| |||||||||||||| ||||
Sbjct: 123 tgatccantcantgctgttgatgcgcatactgcttcaaatttgttcaatgaata 176