Miyakogusa Predicted Gene

Lj0g3v0222439.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0222439.2 Non Chatacterized Hit- tr|I3RZZ7|I3RZZ7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,85.96,0,GOLD,GOLD; EMP24_GP25L,GOLD; EMP24/GP25L/P24 FAMILY
PROTEIN,NULL; TRANSMEMBRANE EMP24 DOMAIN-CONTAIN,CUFF.14443.2
         (393 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57274 similar to UniRef100_A7PMZ6 Cluster: Chromosome...   537   e-152
gnl|LJGI|TC59137 similar to UniRef100_A7PMZ6 Cluster: Chromosome...    60   1e-08

>gnl|LJGI|TC57274 similar to UniRef100_A7PMZ6 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 1084

 Score =  537 bits (271), Expect = e-152
 Identities = 289/295 (97%)
 Strand = Plus / Plus

                                                                       
Query: 54  caaggtgagttctccttatgagaacagttaccaccatggggatcaggtggattctggtaa 113
           ||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| |
Sbjct: 292 caaggtgagttctccttatggaaacagttaccacaatggggatcaggtggattctggtga 351

                                                                       
Query: 114 ttttgcatttactgcagctgaggacggcgactacacagcttgcttttggataccggatag 173
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttttgcatttactgcagctgaggacggcgactacacagcttgcttttggataccggatag 411

                                                                       
Query: 174 tagggccggtgtctcaattgtgaccattgaattcgattggagaactggggttgctgccaa 233
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tagggccggtgtctcaattgtgaccattgaattcgattggagaactggggttgctgccaa 471

                                                                       
Query: 234 agactggtccaaggttgccaagaaagggcaggttgaagtaatggaatttgagttgaagaa 293
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 agactggtccaaggttgccaagaaagggcaggttgaagtaatggaatttgagttgaagaa 531

                                                                  
Query: 294 gctatatgatacagttgcatccatccatgaggagatgttttatcttcgcgaaagg 348
           |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 532 gctatatgatacagttgcatccatccatgaagagatgttttaccttcgcgaaagg 586


>gnl|LJGI|TC59137 similar to UniRef100_A7PMZ6 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (90%)
          Length = 1043

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 238 tggtccaaggttgccaagaaagggcaggttgaagtaatggaatttgagttgaagaagcta 297
           ||||| || ||||| |||||||| || ||||| ||||||||  | ||| | |||||| | 
Sbjct: 535 tggtctaatgttgctaagaaaggccaagttgatgtaatggagctagagctaaagaagttg 594

                                                             
Query: 298 tatgatacagttgcatccatccatgaggagatgttttatcttcgcgaaag 347
            | ||||| ||| | |||||||||||||| |||||||||||||| |||||
Sbjct: 595 caagatactgtttcttccatccatgaggaaatgttttatcttcgtgaaag 644