Miyakogusa Predicted Gene

Lj0g3v0221799.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0221799.1 Non Chatacterized Hit- tr|B9SFZ8|B9SFZ8_RICCO
Exonuclease, putative OS=Ricinus communis GN=RCOM_1153,53.85,2e-19,
,CUFF.14394.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60007 weakly similar to UniRef100_Q9FH89 Cluster: Emb...   361   2e-99

>gnl|LJGI|TC60007 weakly similar to UniRef100_Q9FH89 Cluster: Emb|CAB62118.1; n=1;
           Arabidopsis thaliana|Rep: Emb|CAB62118.1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (5%)
          Length = 1039

 Score =  361 bits (182), Expect = 2e-99
 Identities = 188/190 (98%)
 Strand = Plus / Plus

                                                                       
Query: 96  gctgcttctgcacgggataccaacctctgtaaacattgaaacactacataaaattgttcc 155
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2   gctgcttctgcacgggataccaacctctgtaaacatcgaaacactacataaaattgttcc 61

                                                                       
Query: 156 tggagacttcacaatagaagtgaagccatccaggaaaggtcaaagagcgaaatattctgc 215
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tggagacttcacaacagaagtgaagccatccaggaaaggtcaaagagcgaaatattctgc 121

                                                                       
Query: 216 tttagctacctttaagaatcaacaagaggcatatgaggcctatgaaaatgtccaaggaag 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttagctacctttaagaatcaacaagaggcatatgaggcctatgaaaatgtccaaggaag 181

                     
Query: 276 ccaaacaaag 285
           ||||||||||
Sbjct: 182 ccaaacaaag 191