Miyakogusa Predicted Gene

Lj0g3v0221779.4

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0221779.4 tr|B9HHB4|B9HHB4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_562926 PE=4 SV=1,44.76,1e-18,
,CUFF.14407.4
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58533 weakly similar to UniRef100_Q0J9I1 Cluster: Os0...   567   e-161
gnl|LJGI|FS323298 weakly similar to UniRef100_Q0J9I1 Cluster: Os...   521   e-148

>gnl|LJGI|TC58533 weakly similar to UniRef100_Q0J9I1 Cluster: Os04g0650600 protein;
           n=1; Oryza sativa Japonica Group|Rep: Os04g0650600
           protein - Oryza sativa subsp. japonica (Rice), partial
           (30%)
          Length = 801

 Score =  567 bits (286), Expect = e-161
 Identities = 301/306 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgacaagatcgacgccgcagacaaaaaggtgctggttgatattgtaaaattgtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggacgacaagatcgacgccgcagacaaaaaggtgctggttgatattgtaaaattgtca 195

                                                                       
Query: 61  caaaaaagaggcatgaagggtaatctgggagactggaaagagttcttgaacagctatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 196 caaaaaagaggcatgaagggtaatctgggagactggaaagagttcttgaacagttatgat 255

                                                                       
Query: 121 aaaaagtttggggcaagtatgagtgatccagcaaagaggacccatgaagtcttggctgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaaaagtttggggcaagtatgagtgatccagcaaagaggacccatgaagtcttggctgca 315

                                                                       
Query: 181 tttctgaagactttctccatggaggatgatttgaagttttttggcaacatcatgcgacat 240
           ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||
Sbjct: 316 tttctgaagactttctccaaggaggatgatttgaagttttttgccaacatcatgcggcat 375

                                                                       
Query: 241 cattcaagtcaatactcggtagagaaactgaaagataaatctcatgattcacctgagcag 300
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cattcaaatcaatactcggtagagaaactgaaagataaatctcatgattcacctgagcag 435

                 
Query: 301 gggcta 306
           ||||||
Sbjct: 436 gggcta 441


>gnl|LJGI|FS323298 weakly similar to UniRef100_Q0J9I1 Cluster: Os04g0650600 protein;
           n=1; Oryza sativa Japonica Group|Rep: Os04g0650600
           protein - Oryza sativa subsp. japonica (Rice), partial
           (12%)
          Length = 697

 Score =  521 bits (263), Expect = e-148
 Identities = 266/267 (99%)
 Strand = Plus / Plus

                                                                       
Query: 34  gtgctggttgatattgtaaaattgtcacaaaaaagaggcatgaagggtaatctgggagac 93
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gtgctggttgatattgtaaaattgtcacaaaaaagaggcatgaagggtaatctgggagac 395

                                                                       
Query: 94  tggaaagagttcttgaacagctatgataaaaagtttggggcaagtatgagtgatccagca 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tggaaagagttcttgaacagctatgataaaaagtttggggcaagtatgagtgatccagca 455

                                                                       
Query: 154 aagaggacccatgaagtcttggctgcatttctgaagactttctccatggaggatgatttg 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aagaggacccatgaagtcttggctgcatttctgaagactttctccatggaggatgatttg 515

                                                                       
Query: 214 aagttttttggcaacatcatgcgacatcattcaagtcaatactcggtagagaaactgaaa 273
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 516 aagttttttggcaacatcatgcgacatcattcaaatcaatactcggtagagaaactgaaa 575

                                      
Query: 274 gataaatctcatgattcacctgagcag 300
           |||||||||||||||||||||||||||
Sbjct: 576 gataaatctcatgattcacctgagcag 602



 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 1   atggacgacaagatcgacgccgcagacaaaaag 33
           |||||||||||||||||||||||||||||||||
Sbjct: 150 atggacgacaagatcgacgccgcagacaaaaag 182