Miyakogusa Predicted Gene

Lj0g3v0221619.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0221619.1 Non Chatacterized Hit- tr|I1KUV7|I1KUV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,89.47,0.0000000000002,seg,NULL,CUFF.14376.1
         (228 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS348578 weakly similar to UniRef100_A7P6T4 Cluster: Ch...   357   2e-98
gnl|LJGI|GO036990 similar to UniRef100_A7P6T4 Cluster: Chromosom...   141   2e-33

>gnl|LJGI|FS348578 weakly similar to UniRef100_A7P6T4 Cluster: Chromosome chr9
           scaffold_7, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 610

 Score =  357 bits (180), Expect = 2e-98
 Identities = 212/227 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaactcttcttgcgtcatggatgtcgtgtctgcaggtagaagattatggggttttcca 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atgaacttttcttgcgtcatggatgtcgtgtctgcaggtagaagattatggggttttcca 370

                                                                       
Query: 61  agatttgttggtgactgtgcaagtggtattaagaagtatcctccaggaacaatttcagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agatttgttggtgactgtgcaagtggtattaagaagtatcctccaggaacaatttcagag 310

                                                                       
Query: 121 cagaagagttatatcactaattcttacgatttcccnnnnnnnnnnnnnctgttgctttac 180
           |||||||||||||||||||||||||||||||||||             ||||||||||||
Sbjct: 309 cagaagagttatatcactaattcttacgatttccctttttttttttttctgttgctttac 250

                                                          
Query: 181 tccacatatgcatgcgtagccagtctgaagcccggacaaaggaagag 227
           |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 249 tccacatatgcatgcgtagccagtttgaagcccggacaaaggaagag 203


>gnl|LJGI|GO036990 similar to UniRef100_A7P6T4 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (21%)
          Length = 731

 Score =  141 bits (71), Expect = 2e-33
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                       
Query: 35  caggtagaagattatggggttttccaagatttgttggtgactgtgcaagtggtattaaga 94
           ||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||||
Sbjct: 382 caggtagaagattatggggatttccgagatttgctggtgactgtgccagtggtattaaga 441

                                                              
Query: 95  agtatcctccaggaacaatttcagagcagaagagttatatcactaattctt 145
           |||| ||||||||||| |||| ||||||||| ||| |||||||| ||||||
Sbjct: 442 agtaccctccaggaaccattttagagcagaaaagtgatatcactgattctt 492