Miyakogusa Predicted Gene

Lj0g3v0219829.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0219829.1 tr|D7L8S1|D7L8S1_ARALL Peptidoglycan-binding LysM
domain-containing protein OS=Arabidopsis lyrata su,36.27,2e-18,no
description,NULL; LysM domain,NULL; Lysin motif,Peptidoglycan-binding
Lysin subgroup; seg,NULL; L,CUFF.14224.1
         (873 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW624826 similar to UniRef100_A7NVC3 Cluster: Chromosom...   204   7e-52

>gnl|LJGI|BW624826 similar to UniRef100_A7NVC3 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 486

 Score =  204 bits (103), Expect = 7e-52
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  cactgacccttctgtgcttgatgtgggtcagagccttgtggtgcctcttccttgtacttg 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cactgacccttctgtgcttgatgtgggtcagagccttgtggtgcctcttccttgtacttg 443

                                                      
Query: 90  cttcaatggctctgataactctctgcctgctatttacctctca 132
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttcaatggctctgataactctctgcctgctatttacctctca 486