Miyakogusa Predicted Gene
- Lj0g3v0218309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0218309.1 Non Chatacterized Hit- tr|I1KKR5|I1KKR5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,28.81,0.00000000000001, ,CUFF.14106.1
(616 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72629 926 0.0
gnl|LJGI|TC68850 UniRef100_Q96AQ8-2 Cluster: Isoform 2 of Q96AQ8... 325 2e-88
gnl|LJGI|GO036823 254 6e-67
gnl|LJGI|BW599124 192 2e-48
>gnl|LJGI|TC72629
Length = 688
Score = 926 bits (467), Expect = 0.0
Identities = 467/467 (100%)
Strand = Plus / Plus
Query: 1 atgcctccttctcatccttcaaagttgaaacgcaaaaggaagaccacggagccatataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 atgcctccttctcatccttcaaagttgaaacgcaaaaggaagaccacggagccatataat 281
Query: 61 cctctggatgaaggtgaggatcaaagggaagtcacgtcctttgcttcccgttcaatccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctctggatgaaggtgaggatcaaagggaagtcacgtcctttgcttcccgttcaatccta 341
Query: 121 cctacaaaatttggtaatattttatcttttaattctggtgggtttctttttcaaaatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cctacaaaatttggtaatattttatcttttaattctggtgggtttctttttcaaaatctt 401
Query: 181 attgaggaacaaggtttagaccaaatgtttgaagacactgttgaatattatcccgatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 attgaggaacaaggtttagaccaaatgtttgaagacactgttgaatattatcccgatttg 461
Query: 241 gttaaggtgttttattgcaaccttaaggtagaaaagaatgttttgtattctcaagttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gttaaggtgttttattgcaaccttaaggtagaaaagaatgttttgtattctcaagttaag 521
Query: 301 ggcaagaagattcgcatggatgttgctacttttgggaactgtgctcgtattcctagtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ggcaagaagattcgcatggatgttgctacttttgggaactgtgctcgtattcctagtgtg 581
Query: 361 ggactcgagttgggtgatggtttaccatgtccttggtctgattttgataagaaagcttat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ggactcgagttgggtgatggtttaccatgtccttggtctgattttgataagaaagcttat 641
Query: 421 tatacctctttgtgtcgtgagtctaagttagcatctttgcttaagaa 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tatacctctttgtgtcgtgagtctaagttagcatctttgcttaagaa 688
>gnl|LJGI|TC68850 UniRef100_Q96AQ8-2 Cluster: Isoform 2 of Q96AQ8 ; n=1; Homo
sapiens|Rep: Isoform 2 of Q96AQ8 - Homo sapiens
(Human), partial (5%)
Length = 903
Score = 325 bits (164), Expect = 2e-88
Identities = 177/180 (98%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 433 tgtcgtgagtctaagttagcatctttgcttaagaaaagggaactttgtgagactcataag 492
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtcgtgagtctaagttagcatctt-gcttaagaaaagggaactttgtgagactcataag 59
Query: 493 acaaaggacacaatgcttgttggtattttgaatcctgatgatcgcctgcttcactatttt 552
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 60 acaaaggacacaatgcttgttggtattttgaatcgtgatgatcgcgtgcttcactatttt 119
Query: 553 atgacctatgtctttttaccaaagggtacaaaccatgctcaaattaatgagttggaattg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgacctatgtctttttaccaaagggtacaaaccatgctcaaattaatgagttggaattg 179
>gnl|LJGI|GO036823
Length = 539
Score = 254 bits (128), Expect = 6e-67
Identities = 311/370 (84%), Gaps = 4/370 (1%)
Strand = Plus / Plus
Query: 182 ttgaggaacaaggtttagaccaaatgtttgaa-gacactgttgaatattatcccgatttg 240
||||||||||||||||| ||| ||||| | | || | |||||| |||||||| |||| |
Sbjct: 170 ttgaggaacaaggtttaaacctaatgtgtaattgataatgttgagtattatccggattcg 229
Query: 241 gttaaggtgttttattgcaaccttaaggtagaaaagaatgttttgtattctcaagttaag 300
|||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 230 gttaaggttttttattgcaaccttaaggtagaaaaccatgttttgacttctcaagttaag 289
Query: 301 ggcaagaagattcgcatggatgttgctacttttgggaactgtgctc---gtattcctagt 357
|| | || |||| |||||||| ||||||||||||||||| || | |||||||||||
Sbjct: 290 ggaaccaatattcacatggatgctgctacttttgggaactatggtacgggtattcctagt 349
Query: 358 gtgggactcgagttgggtgatggtttaccatgtccttggtctgattttgataagaaagct 417
| ||| ||| |||||||||||||| |||||||||||||||| |||| |||||||||| |
Sbjct: 350 gaggggctcaagttgggtgatggtgtaccatgtccttggtcagattatgataagaaaaat 409
Query: 418 tattatacctctttgtgtcgtgagtctaagttagcatctttgcttaagaaaagggaactt 477
|||||| || |||||| ||| |||||||||| | ||||||||||||||| ||| |
Sbjct: 410 tattatgtttccttgtgttgtgcgtctaagttacaagggttgcttaagaaaaggaaacat 469
Query: 478 tgtgagactcataagacaaaggacacaatgcttgttggtattttgaatcctgatgatcgc 537
||||||| | ||||||||||||||||||| ||||||| |||| |||||| |||||||
Sbjct: 470 tgtgagatttctaagacaaaggacacaatgactgttggtgttttaaatcctaatgatcgt 529
Query: 538 ctgcttcact 547
|||||||||
Sbjct: 530 atgcttcact 539
>gnl|LJGI|BW599124
Length = 487
Score = 192 bits (97), Expect = 2e-48
Identities = 125/133 (93%), Gaps = 1/133 (0%)
Strand = Plus / Plus
Query: 166 ctttttcaaaatcttattgaggaacaaggtttagaccaaatgtt-tgaagacactgttga 224
|||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||
Sbjct: 355 ctttttcaaaatcttattgaagaacaaggtttaaaccaaatgttatgaagacactgttga 414
Query: 225 atattatcccgatttggttaaggtgttttattgcaaccttaaggtagaaaagaatgtttt 284
||||| ||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 415 atattggcccgatttggttaaggtgttttattgcaaccttaaagaaaaaaagaatgtttt 474
Query: 285 gtattctcaagtt 297
|||||||||||||
Sbjct: 475 gtattctcaagtt 487