Miyakogusa Predicted Gene

Lj0g3v0217929.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0217929.1 Non Chatacterized Hit- tr|I1LIT3|I1LIT3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15873
PE,85.11,0,AAA,ATPase, AAA-type, conserved site; AAA-FAMILY
ATPASE,NULL; AAA ATPASE,NULL; P-loop containing nuc,gene.g16864.t1.1
         (465 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81802 similar to UniRef100_A7P2W5 Cluster: Chromosome...   274   5e-73
gnl|LJGI|TC76438 similar to UniRef100_Q6YUV9 Cluster: Transition...    72   3e-12

>gnl|LJGI|TC81802 similar to UniRef100_A7P2W5 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (23%)
          Length = 716

 Score =  274 bits (138), Expect = 5e-73
 Identities = 180/194 (92%)
 Strand = Plus / Plus

                                                                       
Query: 38  agtggtatggagaagaggaaaaattaaccaaagcacttttctcattagccagcaagcttg 97
           |||||| |||||| |  ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 523 agtggtttggagatgctgaaaaattaaccaaagcacttttctcatttgccagcaagcttg 582

                                                                       
Query: 98  ctcctgtcattatatttgttgatgaaattgacagtttgcttggtgctcgaggtcgtgctt 157
           |||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct: 583 ctcctgtcattatatttgttgatgaagttgacagtttgcttggtgctcgaggtggcgctt 642

                                                                       
Query: 158 ctgagcatgaggccactagaaaattgaggaacgagttcatggctgagtgggatggactaa 217
            |||||||||||||||||||| | ||||||||||||||||||||| |||||||||| | |
Sbjct: 643 ttgagcatgaggccactagaagaatgaggaacgagttcatggctgcgtgggatggattga 702

                         
Query: 218 ggtcaaaagaaaac 231
           ||||||||||||||
Sbjct: 703 ggtcaaaagaaaac 716


>gnl|LJGI|TC76438 similar to UniRef100_Q6YUV9 Cluster: Transitional endoplasmic
           reticulum ATPase-like; n=1; Oryza sativa Japonica
           Group|Rep: Transitional endoplasmic reticulum
           ATPase-like - Oryza sativa subsp. japonica (Rice),
           partial (19%)
          Length = 645

 Score = 71.9 bits (36), Expect = 3e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 412 aacttgactgatggatactctggcagtgatttgaag 447
           ||||||||||||||||||||||||||||||||||||
Sbjct: 1   aacttgactgatggatactctggcagtgatttgaag 36