Miyakogusa Predicted Gene
- Lj0g3v0217659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0217659.1 tr|B9HBX1|B9HBX1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561467 PE=3
SV=1,52.88,2e-18,SUBFAMILY NOT NAMED,NULL; NITRATE, FROMATE, IRON
DEHYDROGENASE,NULL; A_tha_TIGR01569: plant integral,CUFF.14060.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60104 weakly similar to UniRef100_A7PP95 Cluster: Chr... 1162 0.0
gnl|LJGI|TC58060 weakly similar to UniRef100_A7PP95 Cluster: Chr... 432 e-120
gnl|LJGI|AV428062 weakly similar to UniRef100_A7PP95 Cluster: Ch... 216 1e-55
gnl|LJGI|AV781219 similar to UniRef100_A8J8X1 Cluster: Predicted... 72 4e-12
>gnl|LJGI|TC60104 weakly similar to UniRef100_A7PP95 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (79%)
Length = 811
Score = 1162 bits (586), Expect = 0.0
Identities = 592/594 (99%)
Strand = Plus / Plus
Query: 1 atgtcaactactattgatatgcctgggtcaagcaaagctgctaaagctggaaaacctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgtcaactactattgatatgcctgggtcaagcaaagctgctaaagctggaaaacctgtt 145
Query: 61 ttagttacaacaccgtcaaggccaggaggatggaagaaaggggtagccataatggacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttagttacaacaccgtcaaggccaggaggatggaagaaaggggtagccataatggacttc 205
Query: 121 atactgaggttaggtgccatagctgctgctctgggtgccgccgccaccatgggattaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atactgaggttaggtgccatagctgctgctctgggtgccgccgccaccatgggattaagt 265
Query: 181 gatcaaactctccctttcttcactcagttctttcagtttgaagctagctacgatagcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gatcaaactctccctttcttcactcagttctttcagtttgaagctagctacgatagcttt 325
Query: 241 actacctttcagttttttgttattacaatggcattggtggctggatacctggtcctatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 actacctttcagttttttgttattacaatggcattggtggctggatacctggtcctatcc 385
Query: 301 cttcctttgtctatagtagctattgtgcgccctcatgcagctggaccaaggcttttcctc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cttcctttgtctatagtagctgttgtgcgccctcatgcagctggaccaaggcttttcctc 445
Query: 361 atcatcctagacactgtgtttcttactctagccactgctagtggtgcttcagctgcttca 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atcatcctaggcactgtgtttcttactctagccactgctagtggtgcttcagctgcttca 505
Query: 421 atagtttacttagcacacaacggcaatcaggacaccaactggatagccatctgcaaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atagtttacttagcacacaacggcaatcaggacaccaactggatagccatctgcaaccaa 565
Query: 481 tttggtgacttctgcgcgcagaccagtggagctgtcgtctcatcgctcgttgctgtcctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tttggtgacttctgcgcgcagaccagtggagctgtcgtctcatcgctcgttgctgtcctt 625
Query: 541 gtctttgtattgttgattgtcatgtctgctctcgttcttgggaagaagcattga 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtctttgtattgttgattgtcatgtctgctctcgttcttgggaagaagcattga 679
>gnl|LJGI|TC58060 weakly similar to UniRef100_A7PP95 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (80%)
Length = 884
Score = 432 bits (218), Expect = e-120
Identities = 425/494 (86%)
Strand = Plus / Plus
Query: 77 caaggccaggaggatggaagaaaggggtagccataatggacttcatactgaggttaggtg 136
|||||||||||||||||||||||||| |||| ||| ||||||| | || ||||||||||
Sbjct: 193 caaggccaggaggatggaagaaagggatagctatagtggactttgttctaaggttaggtg 252
Query: 137 ccatagctgctgctctgggtgccgccgccaccatgggattaagtgatcaaactctccctt 196
| ||||||||||||||||||| || |||| |||| | | || || ||||||||||
Sbjct: 253 cagtagctgctgctctgggtgctgctaccacaatggcaacagccgaccagactctccctt 312
Query: 197 tcttcactcagttctttcagtttgaagctagctacgatagctttactacctttcagtttt 256
||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 313 tcttcactcagttctttcagtttgaagctagttatgatagctttactaccttccagtttt 372
Query: 257 ttgttattacaatggcattggtggctggatacctggtcctatcccttcctttgtctatag 316
| || ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||
Sbjct: 373 tcgtgattacaatggcattggtgggtggctacctggtcctatccctgcctttgtctatag 432
Query: 317 tagctattgtgcgccctcatgcagctggaccaaggcttttcctcatcatcctagacactg 376
|| | || | |||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 433 tatccatcattcgccctcatgcacttggaccaaagcttttcctcatcatcctagacactg 492
Query: 377 tgtttcttactctagccactgctagtggtgcttcagctgcttcaatagtttacttagcac 436
||||||| ||| | || |||||||||| |||||| |||||| | | |||||| | || |
Sbjct: 493 tgtttctgactttggcaactgctagtgctgcttctgctgctgcggtggtttacgtggctc 552
Query: 437 acaacggcaatcaggacaccaactggatagccatctgcaaccaatttggtgacttctgcg 496
||||||||||||| ||| |||||||| | ||||||||||| || |||| ||| ||||| |
Sbjct: 553 acaacggcaatcaagactccaactggcttgccatctgcaatcagtttgctgatttctgtg 612
Query: 497 cgcagaccagtggagctgtcgtctcatcgctcgttgctgtccttgtctttgtattgttga 556
| || |||||||| ||||| || ||||| |||||||| || |||||||||| |||||||
Sbjct: 613 cacaaaccagtggcgctgtggtgtcatcactcgttgcggtggttgtctttgtgttgttga 672
Query: 557 ttgtcatgtctgct 570
||||||||||||||
Sbjct: 673 ttgtcatgtctgct 686
>gnl|LJGI|AV428062 weakly similar to UniRef100_A7PP95 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (44%)
Length = 386
Score = 216 bits (109), Expect = 1e-55
Identities = 208/241 (86%)
Strand = Plus / Plus
Query: 78 aaggccaggaggatggaagaaaggggtagccataatggacttcatactgaggttaggtgc 137
||||||||||||||||||||||||| |||||||| ||||||| | || |||||||||||
Sbjct: 116 aaggccaggaggatggaagaaagggatagccatagtggactttgttctaaggttaggtgc 175
Query: 138 catagctgctgctctgggtgccgccgccaccatgggattaagtgatcaaactctcccttt 197
|||||||| ||||| ||||| || |||| |||| | | ||||| || ||||| ||
Sbjct: 176 aatagctgcagctctaggtgctgctaccacaatggcaacagccgatcagaccctcccctt 235
Query: 198 cttcactcagttctttcagtttgaagctagctacgatagctttactacctttcagttttt 257
||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct: 236 cttcactcagttctttcagttcgaagctagttatgatagctttactaccttccagttttt 295
Query: 258 tgttattacaatggcattggtggctggatacctggtcctatcccttcctttgtctatagt 317
|| ||||||||||||||||||| ||| ||||| ||||| ||||| ||||||||||||||
Sbjct: 296 cgtgattacaatggcattggtgggtggctacctagtcctttccctgcctttgtctatagt 355
Query: 318 a 318
|
Sbjct: 356 a 356
>gnl|LJGI|AV781219 similar to UniRef100_A8J8X1 Cluster: Predicted protein; n=1;
Chlamydomonas reinhardtii|Rep: Predicted protein -
Chlamydomonas, partial (2%)
Length = 435
Score = 71.9 bits (36), Expect = 4e-12
Identities = 84/99 (84%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 281 ctggatacctggtcctatccctt--cctttgtctatagtagctattgtgcgccctcatgc 338
|||||||| |||||||||| || || ||||||||| ||||||||||| | ||||||
Sbjct: 345 ctggatacgtggtcctatctctctacccttgtctatattagctattgtgagaactcatgt 286
Query: 339 agctggaccaaggcttttcctcatcatcctagacactgt 377
|| | |||||||| |||||||||||||||||||| ||||
Sbjct: 285 agttagaccaaggtttttcctcatcatcctagaccctgt 247