Miyakogusa Predicted Gene

Lj0g3v0217619.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0217619.1 tr|Q3LT95|Q3LT95_VIBHA 50S ribosomal protein L27
OS=Vibrio harveyi GN=rpmA PE=3
SV=1,73.44,2e-19,Ribosomal_L27,Ribosomal protein L27;
RIBOSOMAL_L27,Ribosomal protein L27, conserved site; RIBOSOMAL
,CUFF.14056.1
         (420 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64598 homologue to UniRef100_A7P912 Cluster: Chromoso...   833   0.0  
gnl|LJGI|TC67548 homologue to UniRef100_A7P912 Cluster: Chromoso...   737   0.0  

>gnl|LJGI|TC64598 homologue to UniRef100_A7P912 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (88%)
          Length = 819

 Score =  833 bits (420), Expect = 0.0
 Identities = 420/420 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagagtctccttattagattcagatagcagcaacacacccaaagaagaaccacacttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28  atgagagtctccttattagattcagatagcagcaacacacccaaagaagaaccacacttc 87

                                                                       
Query: 61  caaccccaaactcgctcaaggcagtgtctttatcacatagaaaacatgaattttggagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  caaccccaaactcgctcaaggcagtgtctttatcacatagaaaacatgaattttggagca 147

                                                                       
Query: 121 tcattgtgcagacgattgagtatcaaggaacttgtgacaaatgttcctgtatacagaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tcattgtgcagacgattgagtatcaaggaacttgtgacaaatgttcctgtatacagaagc 207

                                                                       
Query: 181 actggtgatgtttctggagaagggttgagtatggttttcagtcgttgggcctccaagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 actggtgatgtttctggagaagggttgagtatggttttcagtcgttgggcctccaagaag 267

                                                                       
Query: 241 acagctggttccacaaagaatggacgggactcaaaacccaagaacctaggagtgaagaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 acagctggttccacaaagaatggacgggactcaaaacccaagaacctaggagtgaagaaa 327

                                                                       
Query: 301 tttggtggggagagggtgatacctggaaatatcattgttagacagcgtggtactcgtttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tttggtggggagagggtgatacctggaaatatcattgttagacagcgtggtactcgtttt 387

                                                                       
Query: 361 catcccggaaactatgttggaatagggaaagatcatactctgtttgctttgaagcagggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 catcccggaaactatgttggaatagggaaagatcatactctgtttgctttgaagcagggc 447


>gnl|LJGI|TC67548 homologue to UniRef100_A7P912 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (88%)
          Length = 707

 Score =  737 bits (372), Expect = 0.0
 Identities = 372/372 (100%)
 Strand = Plus / Plus

                                                                       
Query: 49  gaaccacacttccaaccccaaactcgctcaaggcagtgtctttatcacatagaaaacatg 108
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   gaaccacacttccaaccccaaactcgctcaaggcagtgtctttatcacatagaaaacatg 64

                                                                       
Query: 109 aattttggagcatcattgtgcagacgattgagtatcaaggaacttgtgacaaatgttcct 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aattttggagcatcattgtgcagacgattgagtatcaaggaacttgtgacaaatgttcct 124

                                                                       
Query: 169 gtatacagaagcactggtgatgtttctggagaagggttgagtatggttttcagtcgttgg 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtatacagaagcactggtgatgtttctggagaagggttgagtatggttttcagtcgttgg 184

                                                                       
Query: 229 gcctccaagaagacagctggttccacaaagaatggacgggactcaaaacccaagaaccta 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gcctccaagaagacagctggttccacaaagaatggacgggactcaaaacccaagaaccta 244

                                                                       
Query: 289 ggagtgaagaaatttggtggggagagggtgatacctggaaatatcattgttagacagcgt 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggagtgaagaaatttggtggggagagggtgatacctggaaatatcattgttagacagcgt 304

                                                                       
Query: 349 ggtactcgttttcatcccggaaactatgttggaatagggaaagatcatactctgtttgct 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggtactcgttttcatcccggaaactatgttggaatagggaaagatcatactctgtttgct 364

                       
Query: 409 ttgaagcagggc 420
           ||||||||||||
Sbjct: 365 ttgaagcagggc 376