Miyakogusa Predicted Gene
- Lj0g3v0217599.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0217599.1 CUFF.14054.1
(903 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67332 UniRef100_A9SBB4 Cluster: Predicted protein; n=... 62 6e-09
gnl|LJGI|AV426437 weakly similar to UniRef100_Q1SKV6 Cluster: RN... 56 4e-07
gnl|LJGI|TC66918 weakly similar to UniRef100_Q1SKV6 Cluster: RNA... 56 4e-07
gnl|LJGI|TC64588 UniRef100_A3XSE8 Cluster: Transcriptional regul... 56 4e-07
gnl|LJGI|TC64081 similar to UniRef100_A6VU03 Cluster: Phosphonat... 56 4e-07
gnl|LJGI|TC76544 54 2e-06
>gnl|LJGI|TC67332 UniRef100_A9SBB4 Cluster: Predicted protein; n=1; Physcomitrella
patens subsp. patens|Rep: Predicted protein -
Physcomitrella patens subsp. patens, partial (10%)
Length = 570
Score = 61.9 bits (31), Expect = 6e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 873 tattgtcacgacccaaaatcctaagccgtga 903
|||||||||||||||||||||||||||||||
Sbjct: 423 tattgtcacgacccaaaatcctaagccgtga 453
>gnl|LJGI|AV426437 weakly similar to UniRef100_Q1SKV6 Cluster: RNA-directed DNA
polymerase; n=1; Medicago truncatula|Rep: RNA-directed
DNA polymerase - Medicago truncatula (Barrel medic),
partial (5%)
Length = 303
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 876 tgtcacgacccaaaatcctaagccgtga 903
||||||||||||||||||||||||||||
Sbjct: 206 tgtcacgacccaaaatcctaagccgtga 179
>gnl|LJGI|TC66918 weakly similar to UniRef100_Q1SKV6 Cluster: RNA-directed DNA
polymerase; n=1; Medicago truncatula|Rep: RNA-directed
DNA polymerase - Medicago truncatula (Barrel medic),
partial (9%)
Length = 1346
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 876 tgtcacgacccaaaatcctaagccgtga 903
||||||||||||||||||||||||||||
Sbjct: 778 tgtcacgacccaaaatcctaagccgtga 751
>gnl|LJGI|TC64588 UniRef100_A3XSE8 Cluster: Transcriptional regulators, LysR family
protein; n=1; Vibrio sp. MED222|Rep: Transcriptional
regulators, LysR family protein - Vibrio sp. MED222,
partial (5%)
Length = 861
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 876 tgtcacgacccaaaatcctaagccgtga 903
||||||||||||||||||||||||||||
Sbjct: 729 tgtcacgacccaaaatcctaagccgtga 702
>gnl|LJGI|TC64081 similar to UniRef100_A6VU03 Cluster: Phosphonate ABC transporter,
periplasmic phosphonate-binding protein precursor; n=1;
Marinomonas sp. MWYL1|Rep: Phosphonate ABC transporter,
periplasmic phosphonate-binding protein precursor -
Marinomonas sp. MWYL1, partial (5%)
Length = 959
Score = 56.0 bits (28), Expect = 4e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 876 tgtcacgacccaaaatcctaagccgtga 903
||||||||||||||||||||||||||||
Sbjct: 736 tgtcacgacccaaaatcctaagccgtga 709
>gnl|LJGI|TC76544
Length = 875
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 877 gtcacgacccaaaatcctaagccgtga 903
|||||||||||||||||||||||||||
Sbjct: 830 gtcacgacccaaaatcctaagccgtga 804