Miyakogusa Predicted Gene

Lj0g3v0217509.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0217509.1 tr|C1E946|C1E946_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_59600
,31.08,2e-17,no description,Tetratricopeptide-like helical;
SHNi-TPR,Tetratricopeptide, SHNi-TPR domain; HISTONE
,NODE_33790_length_1820_cov_97.925278.path2.1
         (636 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72125 weakly similar to UniRef100_UPI000034F193 Clust...  1037   0.0  

>gnl|LJGI|TC72125 weakly similar to UniRef100_UPI000034F193 Cluster:
           tetratricopeptide repeat (TPR)-containing protein; n=1;
           Arabidopsis thaliana|Rep: tetratricopeptide repeat
           (TPR)-containing protein - Arabidopsis thaliana, partial
           (30%)
          Length = 859

 Score = 1037 bits (523), Expect = 0.0
 Identities = 523/523 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggataagggaaccaaggctatgaaggaagacgatttcggagaagcagctgagaatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atggataagggaaccaaggctatgaaggaagacgatttcggagaagcagctgagaatttc 396

                                                                       
Query: 61  agccgtgctcttgaaatcagggttgctaattatggtgaacttgcacctgaatgtgtcaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agccgtgctcttgaaatcagggttgctaattatggtgaacttgcacctgaatgtgtcaat 456

                                                                       
Query: 121 acgtattacaaatatgggtgtgcccttctatacaaggctcaggaggaagctgatcctttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 acgtattacaaatatgggtgtgcccttctatacaaggctcaggaggaagctgatcctttg 516

                                                                       
Query: 181 ggtgatgtgcccaagaagcaggaggggtctcaacatggctccagtaaagatgaatctgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggtgatgtgcccaagaagcaggaggggtctcaacatggctccagtaaagatgaatctgtg 576

                                                                       
Query: 241 aagagtactatcaatgctgctgaatcttccactgctgcatctttttcaagcaatgctgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aagagtactatcaatgctgctgaatcttccactgctgcatctttttcaagcaatgctgag 636

                                                                       
Query: 301 caggacattgcttctaatgaccaggagtcagcagtggatgatgagtccactaagaattac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caggacattgcttctaatgaccaggagtcagcagtggatgatgagtccactaagaattac 696

                                                                       
Query: 361 caggaagaagatgatgaggatagtgatgctgaagacacagaagctgatgaagatgaatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 caggaagaagatgatgaggatagtgatgctgaagacacagaagctgatgaagatgaatct 756

                                                                       
Query: 421 gaccttgatctggcttggaaaatgcttgatattgctagagcaattgttgaaaagcaatgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaccttgatctggcttggaaaatgcttgatattgctagagcaattgttgaaaagcaatgt 816

                                                      
Query: 481 gtcaacacaattgaacacgtggatatattatcaacattggcag 523
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 gtcaacacaattgaacacgtggatatattatcaacattggcag 859