Miyakogusa Predicted Gene
- Lj0g3v0217429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0217429.1 Non Chatacterized Hit- tr|D7KM80|D7KM80_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,40.17,3e-19,seg,NULL; no description,Protein of unknown
function DUF538; DUF538,Protein of unknown function DUF5,CUFF.14042.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61030 similar to UniRef100_A7P137 Cluster: Chromosome... 773 0.0
gnl|LJGI|BP053103 115 3e-25
>gnl|LJGI|TC61030 similar to UniRef100_A7P137 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 772
Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus
Query: 97 aaatcaaaaggcttaccagctggtctcttaccatcagaggtaaaatccttcaccttctac 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aaatcaaaaggcttaccagctggtctcttaccatcagaggtaaaatccttcaccttctac 235
Query: 157 gaaaatggccgcttggaagtcttcctcaacgcaccatgcctaaccaagtacgagaacagg 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gaaaatggccgcttggaagtcttcctcaacgcaccatgcctaaccaagtacgagaacagg 295
Query: 217 gtctacttcgaacgcgtcgtcaccgccaacctcacctacggtagcctcatcggtgtggag 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtctacttcgaacgcgtcgtcaccgccaacctcacctacggtagcctcatcggtgtggag 355
Query: 277 ggtctgcaacaagaagagcttttcgtttggcttcctgttaaggacatcatcgttgatgat 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ggtctgcaacaagaagagcttttcgtttggcttcctgttaaggacatcatcgttgatgat 415
Query: 337 ccttcttctgggttgatactctttgatattggtctcgctcataaacagctctcactctct 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccttcttctgggttgatactctttgatattggtctcgctcataaacagctctcactctct 475
Query: 397 ctgtttgaagatccaccccactgcaaacctgaaggtgggctgaggaatcatgtgaggaag 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctgtttgaagatccaccccactgcaaacctgaaggtgggctgaggaatcatgtgaggaag 535
Query: 457 gagaaagggttctttgaggctctgaggtag 486
||||||||||||||||||||||||||||||
Sbjct: 536 gagaaagggttctttgaggctctgaggtag 565
>gnl|LJGI|BP053103
Length = 477
Score = 115 bits (58), Expect = 3e-25
Identities = 58/58 (100%)
Strand = Plus / Minus
Query: 429 aggtgggctgaggaatcatgtgaggaaggagaaagggttctttgaggctctgaggtag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aggtgggctgaggaatcatgtgaggaaggagaaagggttctttgaggctctgaggtag 222