Miyakogusa Predicted Gene

Lj0g3v0217409.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0217409.2 Non Chatacterized Hit- tr|B3RPL5|B3RPL5_TRIAD
Putative uncharacterized protein OS=Trichoplax
adhaere,28.86,6e-18,breast cancer carboxy-terminal domain,BRCT domain;
no description,NULL; BRCT domain,BRCT domain; PTC,CUFF.14046.2
         (2319 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW597541 similar to UniRef100_Q70X85 Cluster: MEI1 prot...   492   e-138

>gnl|LJGI|BW597541 similar to UniRef100_Q70X85 Cluster: MEI1 protein; n=1; Arabidopsis
           thaliana|Rep: MEI1 protein - Arabidopsis thaliana
           (Mouse-ear cress), partial (14%)
          Length = 483

 Score =  492 bits (248), Expect = e-138
 Identities = 248/248 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaaagcttattttacaaaatggtggaaaatactctgcggaactgacaaagaattgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atggaaaagcttattttacaaaatggtggaaaatactctgcggaactgacaaagaattgc 283

                                                                       
Query: 61  acacatttgatttctaatgctcctgaaggcgacaaatataaggtggctaaacgttggggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 acacatttgatttctaatgctcctgaaggcgacaaatataaggtggctaaacgttggggc 343

                                                                       
Query: 121 cacatctgtatagtgactagtaaatggttcgatcaatctattgctcgaagagcatgtcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cacatctgtatagtgactagtaaatggttcgatcaatctattgctcgaagagcatgtcta 403

                                                                       
Query: 181 aatgaggagtcttaccctgttcaaagtgggtctatatcttcacttaaagtaactagggac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aatgaggagtcttaccctgttcaaagtgggtctatatcttcacttaaagtaactagggac 463

                   
Query: 241 ttcacagt 248
           ||||||||
Sbjct: 464 ttcacagt 471