Miyakogusa Predicted Gene
- Lj0g3v0216869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0216869.1 Non Chatacterized Hit- tr|I1KXG3|I1KXG3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16107
PE,66.19,0,BURP,BURP domain; FAMILY NOT NAMED,NULL; seg,NULL; no
description,BURP domain,CUFF.14003.1
(1881 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77989 similar to UniRef100_A7QNV3 Cluster: Chromosome... 220 2e-56
gnl|LJGI|TC76003 similar to UniRef100_P93218 Cluster: Polygalact... 82 1e-14
>gnl|LJGI|TC77989 similar to UniRef100_A7QNV3 Cluster: Chromosome chr1 scaffold_135,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_135, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 985
Score = 220 bits (111), Expect = 2e-56
Identities = 333/407 (81%)
Strand = Plus / Plus
Query: 1443 gggtgaaaccaagcgttgtgtaggctcagtcgaggacatgattgactttgcaacctctgt 1502
|||||| |||||||| ||||| || || | ||||| ||| |||| || || ||||||||
Sbjct: 332 gggtgagaccaagcggtgtgtggggtccattgaggatatggttgatttcgccacctctgt 391
Query: 1503 tctgggtcgcgatgtgacggttcggaccacggaaaatgtgaacgggtctaaaaagaacgt 1562
||| || ||| ||||| ||| | ||||| || ||||| |||||||| || ||||| ||
Sbjct: 392 tctcggccgcaatgtggtggtgagaaccaccgagaatgtaaacgggtcgaacaagaaagt 451
Query: 1563 catggtgggccgggttaaagggttgaacggtgggaaggtcacgcagtctgtgtcgtgtca 1622
|||||||| |||||| ||||| | |||||||||||||| || | ||| || || || ||
Sbjct: 452 gatggtgggtcgggttcaaggggtcaacggtgggaaggtgacccggtcggtttcttgcca 511
Query: 1623 ccagagcttgttcccttatttgctttactactgccactcggttcctaaggttcgggtcta 1682
|||||||||||| ||||| | || |||||||| ||||| |||||||||||||||||||
Sbjct: 512 ccagagcttgtttccttaccttctctactactgtcactctcttcctaaggttcgggtcta 571
Query: 1683 cgaagctgatcttctggacccggatacgaaggaaaagattaaccacggtgttgccctttg 1742
| |||| |||||||| |||||| |||| |||| ||||| ||||| |||||||| ||||
Sbjct: 572 ccaagcggatcttcttgacccgaataccaaggccaagatcaaccatggtgttgctgtttg 631
Query: 1743 tcacctagatacgtctgcttggagccccacccatggtgcgttcatggctcttgggtcggg 1802
||| | ||||| |||| |||||||||| ||||||| || || | ||||| ||||||||
Sbjct: 632 tcatgtggatacctctgattggagccccgcccatggagcttttctcgctctcgggtcggg 691
Query: 1803 tccgggtcagattgaagtatgccactggatctttgagaatgacatga 1849
|||||||| |||||| || || |||||||||||||||||||| ||||
Sbjct: 692 tccgggtcggattgaggtttgtcactggatctttgagaatgatatga 738
>gnl|LJGI|TC76003 similar to UniRef100_P93218 Cluster: Polygalacturonase
non-catalytic subunit AroGP3 precursor; n=1; Solanum
lycopersicum|Rep: Polygalacturonase non-catalytic
subunit AroGP3 precursor - Solanum lycopersicum (Tomato)
(Lycopersicon esculentum), partial (6%)
Length = 412
Score = 81.8 bits (41), Expect = 1e-14
Identities = 101/121 (83%)
Strand = Plus / Plus
Query: 844 gacacgttcacaaactacggcgtgaacatgaacaacccgactgagaatttcaagagctac 903
||||||||||| |||||||||||||||||||||||||| || |||| ||||||| ||||
Sbjct: 63 gacacgttcacgaactacggcgtgaacatgaacaaccccaccgagacgttcaagaactac 122
Query: 904 gcaaggaaaagcgtcagagcccccgagaagtttgcaaactacagttaccaggcgaacgtc 963
|| | | | |||||| || ||||||| || |||||||| || ||||||||||||||
Sbjct: 123 gccaaggacagcgtcttcgcagccgagaaattctcaaactaccgtgaccaggcgaacgtc 182
Query: 964 g 964
|
Sbjct: 183 g 183
Score = 69.9 bits (35), Expect = 5e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1000 tatggcaaatcattcaatgaaggaaccgacactttcaaagggtatgccaaa 1050
||||| || |||||||||||||||||||||||||||||||| || ||||||
Sbjct: 249 tatgggaagtcattcaatgaaggaaccgacactttcaaaggatacgccaaa 299