Miyakogusa Predicted Gene

Lj0g3v0216779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0216779.1 Non Chatacterized Hit- tr|C0P6E0|C0P6E0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,41.54,0.0000003,seg,NULL,CUFF.13995.1
         (282 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64936 similar to UniRef100_A7QVH5 Cluster: Chromosome...   559   e-159
gnl|LJGI|BP075652 similar to UniRef100_Q96DR8 Cluster: Mucin-lik...   107   4e-23

>gnl|LJGI|TC64936 similar to UniRef100_A7QVH5 Cluster: Chromosome chr16 scaffold_189,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_189, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 1014

 Score =  559 bits (282), Expect = e-159
 Identities = 282/282 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgccccttcttgatcttctgactgacccacccgaccaagttcccgccttcaatctcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgccccttcttgatcttctgactgacccacccgaccaagttcccgccttcaatctcctt 662

                                                                       
Query: 61  aaaatccggccctgttggctcttttccggtcaccagttcaagcaaaatgacgccgaaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaaatccggccctgttggctcttttccggtcaccagttcaagcaaaatgacgccgaaact 602

                                                                       
Query: 121 gtagacatctcctcttgttgtggacctcccactctgtccatactctggtggaatgtaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtagacatctcctcttgttgtggacctcccactctgtccatactctggtggaatgtaacc 542

                                                                       
Query: 181 aaatgttccagcaatatcagtggtgatatgagtctcgcaggcgctgataagccttgcgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatgttccagcaatatcagtggtgatatgagtctcgcaggcgctgataagccttgcgag 482

                                                     
Query: 241 tccaaaatccgcaacttttggctcaaaatcttcattgagtaa 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccaaaatccgcaacttttggctcaaaatcttcattgagtaa 440


>gnl|LJGI|BP075652 similar to UniRef100_Q96DR8 Cluster: Mucin-like protein 1
           precursor; n=1; Homo sapiens|Rep: Mucin-like protein 1
           precursor - Homo sapiens (Human), partial (10%)
          Length = 363

 Score =  107 bits (54), Expect = 4e-23
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                     
Query: 1   atgccccttcttgatcttctgactgacccacccgaccaagttcccgccttcaatctcc 58
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 306 atgccccttcttgatcttctgactgacccacccgatcaagttcccgccttcaatctcc 363