Miyakogusa Predicted Gene

Lj0g3v0216289.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0216289.1 Non Chatacterized Hit- tr|I3SII0|I3SII0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,100,3e-21,
,CUFF.13956.1
         (213 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81136                                                      188   9e-48
gnl|LJGI|TC79347                                                      188   9e-48
gnl|LJGI|BW599506 similar to UniRef100_A1VH83 Cluster: Molybdate...   167   3e-41

>gnl|LJGI|TC81136 
          Length = 1079

 Score =  188 bits (95), Expect = 9e-48
 Identities = 95/95 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaaatcacaccaaaatgcccttcaattgttgagggtgagaatcaagttctggggaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 atgaaatcacaccaaaatgcccttcaattgttgagggtgagaatcaagttctggggaaga 669

                                              
Query: 61  gtttactttttgtattttttgtttcaagacctcat 95
           |||||||||||||||||||||||||||||||||||
Sbjct: 668 gtttactttttgtattttttgtttcaagacctcat 634


>gnl|LJGI|TC79347 
          Length = 518

 Score =  188 bits (95), Expect = 9e-48
 Identities = 95/95 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaaatcacaccaaaatgcccttcaattgttgagggtgagaatcaagttctggggaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgaaatcacaccaaaatgcccttcaattgttgagggtgagaatcaagttctggggaaga 171

                                              
Query: 61  gtttactttttgtattttttgtttcaagacctcat 95
           |||||||||||||||||||||||||||||||||||
Sbjct: 170 gtttactttttgtattttttgtttcaagacctcat 136


>gnl|LJGI|BW599506 similar to UniRef100_A1VH83 Cluster: Molybdate ABC transporter,
           inner membrane subunit precursor; n=1; Desulfovibrio
           vulgaris subsp. vulgaris DP4|Rep: Molybdate ABC
           transporter, inner membrane subunit precursor -
           Desulfovibrio vulgaris subsp. vulgaris (strain DP4),
           partial (6%)
          Length = 488

 Score =  167 bits (84), Expect = 3e-41
 Identities = 94/96 (97%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaaatcac-accaaaatgcccttcaattgttgagggtgagaatcaagttctggggaag 59
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atgaaatcacgaccaaaatgcccttcaattgttgagggtgagaatcaagttctggggaag 41

                                               
Query: 60  agtttactttttgtattttttgtttcaagacctcat 95
           |||||||||||||||| |||||||||||||||||||
Sbjct: 40  agtttactttttgtatgttttgtttcaagacctcat 5