Miyakogusa Predicted Gene

Lj0g3v0215719.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0215719.1 Non Chatacterized Hit- tr|I3S460|I3S460_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,36.11,4e-19,domain in FBox and BRCT domain containing pl,FBD;
FBD,FBD,CUFF.13907.1
         (606 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78334 similar to UniRef100_Q976J9 Cluster: Lysine bio...   196   1e-49
gnl|LJGI|TC81934 similar to UniRef100_A7QK65 Cluster: Chromosome...   115   3e-25
gnl|LJGI|TC77282                                                       78   7e-14
gnl|LJGI|BP084398                                                      60   2e-08

>gnl|LJGI|TC78334 similar to UniRef100_Q976J9 Cluster: Lysine biosynthesis protein
           lysX; n=1; Sulfolobus tokodaii|Rep: Lysine biosynthesis
           protein lysX - Sulfolobus tokodaii, partial (5%)
          Length = 671

 Score =  196 bits (99), Expect = 1e-49
 Identities = 300/367 (81%)
 Strand = Plus / Plus

                                                                       
Query: 157 aatattcttctgaaagcagtatgtaatgtggagtttttgtgcattcaccagtatcaagct 216
           |||||| ||||||||||| | |||||||||||| ||||| ||||| | ||| || ||| |
Sbjct: 13  aatattattctgaaagcaatgtgtaatgtggagattttgagcattaaacagaatgaagtt 72

                                                                       
Query: 217 gattttgtggtgcctgaatttcctcatgtaaggcatttgggcatcttctttgttagtcat 276
           |||  || |||||||||||||| ||||||||| ||||||  | ||||||| | || ||||
Sbjct: 73  gatgatggggtgcctgaatttcgtcatgtaagacatttgtccctcttcttggatactcat 132

                                                                       
Query: 277 aactggcgtgcggtgcttttgatgctcaagaattgccccaaccttcaaagtttaaaacat 336
           ||||||| |  |||||||||||||||||||||||||||||| ||||||||| |  ||| |
Sbjct: 133 aactggcattgggtgcttttgatgctcaagaattgccccaagcttcaaagtcttgaactt 192

                                                                       
Query: 337 tatttgaatcgatctttggaggctgagagtattctaccttaccttcattttggtgttcct 396
            |||||  |   ||||| || | ||||  | |||||||| ||  |||||||| |||||||
Sbjct: 193 gatttgcttttttcttttgacgttgaggatgttctacctgactctcattttgttgttcct 252

                                                                       
Query: 397 gattgccttacatcaggctttactaagtgctatctcaaatactaccgaggcgcagaaagt 456
           || ||||| ||||||  |||||||||||||||||||||| | ||| | ||| |  |||||
Sbjct: 253 gaatgcctaacatcacactttactaagtgctatctcaaacattacggtggcacgaaaagt 312

                                                                       
Query: 457 gacctactattcgcaaaatatattatgcagaattcaccatcgttacggaccatgagaatt 516
           ||||||| ||| ||||||||||||||| | |||||| |||| |||| | || ||| ||||
Sbjct: 313 gacctacaatttgcaaaatatattatggaaaattcaacatccttactgtccctgacaatt 372

                  
Query: 517 catagtg 523
           || ||||
Sbjct: 373 cacagtg 379


>gnl|LJGI|TC81934 similar to UniRef100_A7QK65 Cluster: Chromosome chr19 scaffold_111,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_111, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1384

 Score =  115 bits (58), Expect = 3e-25
 Identities = 190/234 (81%)
 Strand = Plus / Plus

                                                                        
Query: 289  gtgcttttgatgctcaagaattgccccaaccttcaaagtttaaaacattatttgaatcga 348
            ||||||||||||||||||||||||||||| ||||| ||||| |||| | |||||  |  |
Sbjct: 882  gtgcttttgatgctcaagaattgccccaagcttcagagttttaaacttgatttgcgtgaa 941

                                                                        
Query: 349  tctttggaggctgagagtattctaccttaccttcattttggtgttcctgattgccttaca 408
            | ||  |||| |||   | ||| |||||||  |||||||| ||||||||| |||||||||
Sbjct: 942  ttttctgaggatgaagatgttccaccttactctcattttgttgttcctgaatgccttaca 1001

                                                                        
Query: 409  tcaggctttactaagtgctatctcaaatactaccgaggcgcagaaagtgacctactattc 468
            |||    ||   |||||||||||||| || |||| |||| || ||||||| |||| ||||
Sbjct: 1002 tcacatcttcagaagtgctatctcaagtattacctaggcacaaaaagtgaactacaattc 1061

                                                                  
Query: 469  gcaaaatatattatgcagaattcaccatcgttacggaccatgagaattcatagt 522
            |||||||| || |||||||| ||| |||| |||| | ||||||||||| |||||
Sbjct: 1062 gcaaaatacatcatgcagaactcaacatctttacagtccatgagaatttatagt 1115



 Score =  105 bits (53), Expect = 3e-22
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                       
Query: 109 cccaacttggtcagggcagatctacgttttgttggtatggatcatactaatattcttctg 168
           ||||| |||||||||||| ||||||||  ||| ||| ||||| |||||||||||||||||
Sbjct: 716 cccaagttggtcagggcaaatctacgtcatgtcggtttggataatactaatattcttctg 775

                                            
Query: 169 aaagcagtatgtaatgtggagtttttgtgcatt 201
           || ||| |||||||||||||||||||| |||||
Sbjct: 776 aatgcaatatgtaatgtggagtttttgagcatt 808


>gnl|LJGI|TC77282 
          Length = 497

 Score = 77.8 bits (39), Expect = 7e-14
 Identities = 84/99 (84%)
 Strand = Plus / Plus

                                                                       
Query: 390 tgttcctgattgccttacatcaggctttactaagtgctatctcaaatactaccgaggcgc 449
           ||||||||| |||||||| ||| |||| ||||||||||||||||||   | |  |||| |
Sbjct: 39  tgttcctgaatgccttacttcatgcttaactaagtgctatctcaaacgtttcgaaggcac 98

                                                  
Query: 450 agaaagtgacctactattcgcaaaatatattatgcagaa 488
           ||||| |||||||| ||| ||||| ||||||||||||||
Sbjct: 99  agaaaatgacctacaatttgcaaagtatattatgcagaa 137


>gnl|LJGI|BP084398 
          Length = 460

 Score = 60.0 bits (30), Expect = 2e-08
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 390 tgttcctgattgccttacatcaggctttactaagtgctatctcaaa 435
           ||||||||| |||||||| ||| |||| ||||||||||||||||||
Sbjct: 424 tgttcctgaatgccttacttcatgcttaactaagtgctatctcaaa 379