Miyakogusa Predicted Gene

Lj0g3v0214319.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0214319.1 Non Chatacterized Hit- tr|D7MJ47|D7MJ47_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,68.33,1e-17,
,CUFF.13802.1
         (1269 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320042 weakly similar to UniRef100_A7PLW2 Cluster: Ch...   973   0.0  

>gnl|LJGI|FS320042 weakly similar to UniRef100_A7PLW2 Cluster: Chromosome chr14
           scaffold_21, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (14%)
          Length = 759

 Score =  973 bits (491), Expect = 0.0
 Identities = 517/528 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgaatcttcttcaacttgtcttgttccagagggcgacccgattcgtgcgcttagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 atggctgaatcttcttcaacttgtcttgttccagagggcgacccgattcgtgcgcttagc 291

                                                                       
Query: 61  gaatctatctcttttgggaggtttatgtccgagagactggattgggagaaatggtcagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gaatctatctcttttgggaggtttatgtccgagagactggattgggagaaatggtcagcg 351

                                                                       
Query: 121 ttcacgacacacaaacgctatgttgaggaagctgaaaagtattccaagccaggttccgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttcacgacacacaaacgctatgttgaggaagctgaaaagtattccaagccaggttccgtt 411

                                                                       
Query: 181 gctgcnnnnnnngcctactttgaggctcattacaagagacacgctgctgagaaagaagct 240
           |||||       ||||||||||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 412 gctgcaaaaaaagcctactttgaggctcattacaagagaaaagctgctgaggaagaagct 471

                                                                       
Query: 241 gcattgatccaagaagaaaatgctcaagttaatggagcttttgattcaaaaactaaggaa 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 472 gcattgatccaagaagaaaatgctcaagttaatggagcttttgattcaaaaagtaaggaa 531

                                                                       
Query: 301 ggaaattgcactgattcatccattgtgatgaagtcgaaagcgaacagccacgagactgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggaaattgcactgattcatccattgtgatgaagtcgaaagcgaacagccacgagactgcc 591

                                                                       
Query: 361 aatgaacagcttggtgaagaagatgctgttgttgattgtgctgatacaaaccaatataat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aatgaacagcttggtgaagaagatgctgttgttgattgtgctgatacaaaccaatataat 651

                                                                       
Query: 421 gagtttgatcctgttgaagtccataaggatgtctcacatccttgtgctgatataaaccac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gagtttgatcctgttgaagtccataaggatgtctcacatccttgtgctgatataaaccac 711

                                                           
Query: 481 tataatgagtttgatcctgtcgaagtccataagaatttaaccattctg 528
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tataatgagtttgatcctgtcgaagtccataagaatttaaccattctg 759