Miyakogusa Predicted Gene

Lj0g3v0213859.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0213859.1 CUFF.13762.1
         (349 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66294 similar to UniRef100_Q6C6K6 Cluster: Yarrowia l...    72   2e-12
gnl|LJGI|TC74663 homologue to UniRef100_A7QVD4 Cluster: Chromoso...    60   9e-09

>gnl|LJGI|TC66294 similar to UniRef100_Q6C6K6 Cluster: Yarrowia lipolytica chromosome
           E of strain CLIB 122 of Yarrowia lipolytica; n=1;
           Yarrowia lipolytica|Rep: Yarrowia lipolytica chromosome
           E of strain CLIB 122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica), partial (5%)
          Length = 659

 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 49/52 (94%), Gaps = 1/52 (1%)
 Strand = Plus / Minus

                                                               
Query: 155 agcgaacaacagaggccaaacaaccactttatctttccgactccgcgagctc 206
           ||||||||||||||||||| ||||||||||||||||||  ||||||||||||
Sbjct: 176 agcgaacaacagaggccaa-caaccactttatctttccacctccgcgagctc 126


>gnl|LJGI|TC74663 homologue to UniRef100_A7QVD4 Cluster: Chromosome chr2
           scaffold_187, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_187, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (38%)
          Length = 675

 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 212 cgtccaaatcaccaacatcgaccacttcgt 241
           ||||||||||||||||||||||||||||||
Sbjct: 32  cgtccaaatcaccaacatcgaccacttcgt 3



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 61/72 (84%), Gaps = 10/72 (13%)
 Strand = Plus / Minus

                                                                       
Query: 17  tggccacaaaaacccacccaatgactggtgaaaactttgacacagaa---caaggtttgt 73
           ||||||||||||||||||||||||       ||||| ||||||||||   ||||||||||
Sbjct: 184 tggccacaaaaacccacccaatga-------aaactatgacacagaagaacaaggtttgt 132

                       
Query: 74  tcgaaattggaa 85
           ||||||||||||
Sbjct: 131 tcgaaattggaa 120