Miyakogusa Predicted Gene

Lj0g3v0213779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0213779.1 tr|B9RD17|B9RD17_RICCO Actin-related protein 2/3
complex subunit 5 OS=Ricinus communis GN=RCOM_16088,76.19,6e-19,ARP2/3
COMPLEX 16 KD SUBUNIT (P16-ARC),ARP2/3 complex 16kDa subunit
(p16-Arc); Arp2/3 complex 16 kDa,CUFF.13758.1
         (411 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66083 similar to UniRef100_A5AQ06 Cluster: Actin-rela...   783   0.0  

>gnl|LJGI|TC66083 similar to UniRef100_A5AQ06 Cluster: Actin-related protein 2/3
           complex subunit 5; n=1; Vitis vinifera|Rep:
           Actin-related protein 2/3 complex subunit 5 - Vitis
           vinifera (Grape), complete
          Length = 647

 Score =  783 bits (395), Expect = 0.0
 Identities = 407/411 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctggagctgaaggattcgtggaagccgataatgcagaggccattatcgccagaatc 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 99  atggctggagctgaaggattcgtggaagctgataatgcagaggccattatcgccagaatc 158

                                                                       
Query: 61  gaacacaaatcgcgcaagatcgaaagcttactcaaacagtataaacccgttgaagccctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaacacaaatcgcgcaagatcgaaagcttactcaaacagtataaacccgttgaagccctt 218

                                                                       
Query: 121 aaaactgcacttgaaggcacgtatgctatgactagtgatgagcgttgcaagtcagcgcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aaaactgcacttgaaggcacgtatgctatgactagtgatgagcgttgcaagtcagcgcat 278

                                                                       
Query: 181 tggattgcggtgcatagagctttaatggctataaaagacgtggatgggatgctttcttcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tggattgcggtgcatagagctttaatggctataaaagacgtggatgggatgctttcttcc 338

                                                                       
Query: 241 ttagatcctgagtactatgatatcctaatgaagtacctgtatagaggcttatctactgga 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 339 ttagatcctgagtactatgatatcctaatgaagtacctgtatagaggcttatttactgga 398

                                                                       
Query: 301 gatcgtccaacatgcgaccaatgtcttaggattcatgaaaaattgacagagaaagctgga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gatcgtccaacatgcgaccaatgtcttaggattcatgaaaaattgacagagaaagctgga 458

                                                              
Query: 361 ctaggttgcattctacgtttcttgactgatactgtaaatacagtatgatct 411
           |||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 459 ctaggttgcattttacgtttcttgactgatgctgtaaatacagtatgatct 509