Miyakogusa Predicted Gene

Lj0g3v0213429.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0213429.1 Non Chatacterized Hit- tr|I1JY03|I1JY03_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46001
PE,88.57,0.0000000008,Copine,Copine,CUFF.13726.1
         (142 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO031905 similar to UniRef100_A7QST8 Cluster: Chromosom...   176   2e-44
gnl|LJGI|TC78635 similar to UniRef100_A7QST8 Cluster: Chromosome...   129   5e-30

>gnl|LJGI|GO031905 similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_162, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 663

 Score =  176 bits (89), Expect = 2e-44
 Identities = 98/101 (97%)
 Strand = Plus / Plus

                                                                       
Query: 23  caggtccaacatcatttgccccagtaatcgacgcaacaattgacactgtggaaagaagca 82
           ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 278 caggtccaacatcatttgccccagtaatcgacgcagcaattaacactgtggaaagaagca 337

                                                    
Query: 83  atggtcaatatcatgttcttgtgattattgctgatgggcag 123
           | |||||||||||||||||||||||||||||||||||||||
Sbjct: 338 acggtcaatatcatgttcttgtgattattgctgatgggcag 378


>gnl|LJGI|TC78635 similar to UniRef100_A7QST8 Cluster: Chromosome chr4 scaffold_162,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_162, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (76%)
          Length = 1554

 Score =  129 bits (65), Expect = 5e-30
 Identities = 95/105 (90%)
 Strand = Plus / Plus

                                                                       
Query: 23  caggtccaacatcatttgccccagtaatcgacgcaacaattgacactgtggaaagaagca 82
           |||||||||||||||||||||| ||||| || ||| | ||||||| ||||||||| | ||
Sbjct: 665 caggtccaacatcatttgcccctgtaattgatgcagccattgacattgtggaaaggaaca 724

                                                        
Query: 83  atggtcaatatcatgttcttgtgattattgctgatgggcaggtta 127
           |||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 725 atggtcaatatcatgttcttgtcattattgctgatggacaggtta 769