Miyakogusa Predicted Gene
- Lj0g3v0213029.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0213029.1 Non Chatacterized Hit- tr|I3SNF0|I3SNF0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.92,0,RNA-BINDING PROTEIN RELATED,NULL; KH_1,K Homology domain,
type 1; K homology RNA-binding domain,K Ho,CUFF.13695.1
(843 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67728 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 1663 0.0
gnl|LJGI|TC72746 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 301 4e-81
gnl|LJGI|TC70263 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 210 1e-53
gnl|LJGI|TC57961 similar to UniRef100_A7Q9W1 Cluster: Chromosome... 103 2e-21
>gnl|LJGI|TC67728 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1450
Score = 1663 bits (839), Expect = 0.0
Identities = 842/843 (99%)
Strand = Plus / Plus
Query: 1 atgtctggtttgtacaatcaaatttcctcacctgcaacagcaagggccagttcaccaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtctggtttgtacaatcaaatttcctcacctgcaacagcaagggccagttcaccaaat 240
Query: 61 ataaacatcagaagcaattttaatgttgatagtcagtacttagcagagctgttagaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataaacatcagaagcaattttaatgttgatagtcagtacttagcagagctgttagaagaa 300
Query: 121 taccagaaactaagacctttcatgcaagtcctacccttatgtaccagactcttaaatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taccagaaactaagacctttcatgcaagtcctacccttatgtaccagactcttaaatcaa 360
Query: 181 gagatcttaagggtttctgggaagaatggattgattcagaaccaaggatttagtgattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagatcttaagggtttctgggaagaatggattgattcagaaccaaggatttagtgattat 420
Query: 241 gacagagtgcagtttggaagccacaatcctagtcttttgccttctttagagacaacaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacagagtgcagtttggaagccacaatcctagtcttttgccttctttagagacaacaaca 480
Query: 301 aattttactggttggaatagcctgtcacataaaggactaaatgtggattggcaaacaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aattttactggttggaatagcctgtcacataaaggactaaatgtggattggcaaacaaca 540
Query: 361 ccttctgtgccaaattctcccattgtgaagaggatcttgcgcttggacattcctagtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccttctgtgccaaattctcccattgtgaagaggatcttgcgcttggacattcctagtgat 600
Query: 421 agctatccaaatttcaatttcgttgggaggcttcttggccctcggggtaattcactgaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agctatccaaatttcaatttcgttgggaggcttcttggccctcggggtaattcactgaag 660
Query: 481 cgagtcgaggctaccacaggttgccgtgtatttattagagggcaaggttcaataaaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgagtcgaggctaccacaggttgccgtgtatttattagagggcaaggttcaataaaagac 720
Query: 541 ccagataaggaagaggttttaaggggaaagccaggctatgagcacctgaatgaaccactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccagataaggaagaggttttaaggggaaagccaggctatgagcacctgaatgaaccactg 780
Query: 601 cacgttttgattgaggctgaactacctgtcaatgttgttgatataaggctgaggcaagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cacgttttgattgaggctgaactacctgtcaatgttgttgatataaggctgaggcaagca 840
Query: 661 caagaaatcatagaaaatctactcaaacccgtggatgagacacaggacttctacaagagg 720
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 841 caagaaatcatagaaaatctactcaaacccgcggatgagacacaggacttctacaagagg 900
Query: 721 caacaactgagagaacttgccatgctgaattccaatttcagagaagagagccctcaactg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 caacaactgagagaacttgccatgctgaattccaatttcagagaagagagccctcaactg 960
Query: 781 agtggtagtctctctccattcacctctaatgaaatcaaaagggcgaaaactgaccaatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agtggtagtctctctccattcacctctaatgaaatcaaaagggcgaaaactgaccaatag 1020
Query: 841 tgt 843
|||
Sbjct: 1021 tgt 1023
>gnl|LJGI|TC72746 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 678
Score = 301 bits (152), Expect = 4e-81
Identities = 308/360 (85%)
Strand = Plus / Plus
Query: 480 gcgagtcgaggctaccacaggttgccgtgtatttattagagggcaaggttcaataaaaga 539
|||||| || |||||||| ||||||||||||| ||| |||||| |||||||||| || ||
Sbjct: 1 gcgagttgaagctaccacgggttgccgtgtatatatcagagggaaaggttcaattaagga 60
Query: 540 cccagataaggaagaggttttaaggggaaagccaggctatgagcacctgaatgaaccact 599
|| ||| |||||||| | |||||||||| ||| |||||||||||||||| |||||| ||
Sbjct: 61 cctagacaaggaagacttgttaaggggaaggccgggctatgagcacctgagtgaaccgct 120
Query: 600 gcacgttttgattgaggctgaactacctgtcaatgttgttgatataaggctgaggcaagc 659
||| |||||||||| ||||| ||||||| |||| |||||||| ||||| ||||||||||
Sbjct: 121 tcacattttgattgaagctgagctacctgccaatattgttgatgtaaggttgaggcaagc 180
Query: 660 acaagaaatcatagaaaatctactcaaacccgtggatgagacacaggacttctacaagag 719
||| |||||||| ||| | |||| || ||||||||||| |||||||||| ||||||||
Sbjct: 181 acaggaaatcatcgaagagatacttaagcccgtggatgaatcacaggacttttacaagag 240
Query: 720 gcaacaactgagagaacttgccatgctgaattccaatttcagagaagagagccctcaact 779
|| ||||| ||||| | ||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 241 acagcaactaagagagcgtgcaatgctcaattccaattttagagaagagagccctcaact 300
Query: 780 gagtggtagtctctctccattcacctctaatgaaatcaaaagggcgaaaactgaccaata 839
|| |||||| ||||||||||||| ||||||||||| ||| |||| ||||| || |||||
Sbjct: 301 tagcggtagtgtctctccattcacttctaatgaaataaaacgggcaaaaacggatcaata 360
>gnl|LJGI|TC70263 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 680
Score = 210 bits (106), Expect = 1e-53
Identities = 196/226 (86%)
Strand = Plus / Plus
Query: 11 tgtacaatcaaatttcctcacctgcaacagcaagggccagttcaccaaatataaacatca 70
|||||||||| |||||||||||| || | |||||| | ||| |||||||||||||| |
Sbjct: 159 tgtacaatcagatttcctcaccttcatcccaaagggctaattctccaaatataaacatga 218
Query: 71 gaagcaattttaatgttgatagtcagtacttagcagagctgttagaagaataccagaaac 130
||||||||||| ||||||||||||| |||||||| |||||| ||| ||| |||||||||
Sbjct: 219 gaagcaattttgatgttgatagtcaatacttagcggagctgctagctgaacaccagaaac 278
Query: 131 taagacctttcatgcaagtcctacccttatgtaccagactcttaaatcaagagatcttaa 190
| |||||||||||||||||||| ||||| |||| |||||| | ||||||||||| ||||
Sbjct: 279 tcagacctttcatgcaagtcctgcccttgtgtagcagacttctcaatcaagagattttaa 338
Query: 191 gggtttctgggaagaatggattgattcagaaccaaggatttagtga 236
||| |||||||||||||||| || | ||||||||||| ||||||||
Sbjct: 339 gggcttctgggaagaatggaatgttgcagaaccaagggtttagtga 384
Score = 139 bits (70), Expect = 3e-32
Identities = 151/178 (84%)
Strand = Plus / Plus
Query: 334 ggactaaatgtggattggcaaacaacaccttctgtgccaaattctcccattgtgaagagg 393
|||||||| ||||||||||| || |||| |||| |||| ||||| ||| ||||||| |
Sbjct: 497 ggactaaacatggattggcaagcaccaccagctgttccaagttctcacatagtgaagaag 556
Query: 394 atcttgcgcttggacattcctagtgatagctatccaaatttcaatttcgttgggaggctt 453
|| ||||||||||| ||||||| || ||||| ||||| | ||||| |||||| |||||
Sbjct: 557 atattgcgcttggatattcctatggaaagctactcaaatcttaattttgttgggcggctt 616
Query: 454 cttggccctcggggtaattcactgaagcgagtcgaggctaccacaggttgccgtgtat 511
||||| ||| |||||||||||||||||||||| || |||||||| |||||||||||||
Sbjct: 617 cttggtcctaggggtaattcactgaagcgagttgaagctaccacgggttgccgtgtat 674
>gnl|LJGI|TC57961 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_68, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1268
Score = 103 bits (52), Expect = 2e-21
Identities = 223/280 (79%)
Strand = Plus / Plus
Query: 430 aatttcaatttcgttgggaggcttcttggccctcggggtaattcactgaagcgagtcgag 489
||||||||||| ||||| || ||||| || ||| | || ||||| ||||| || || ||
Sbjct: 491 aatttcaattttgttggaagacttctgggacctagaggcaattctctgaaacgggtagaa 550
Query: 490 gctaccacaggttgccgtgtatttattagagggcaaggttcaataaaagacccagataag 549
|| || ||||||||| | || ||||||||||| ||| || ||||| || ||||| |||
Sbjct: 551 gcaacaacaggttgcagggtgtttattagaggaacaggatctataaaggatccagacaag 610
Query: 550 gaagaggttttaaggggaaagccaggctatgagcacctgaatgaaccactgcacgttttg 609
|||||| ||||| ||||| |||||||||||||| || |||| || || ||| | |||
Sbjct: 611 gaagagaagttaagaggaaaaccaggctatgagcatctctatgagccgctccacatattg 670
Query: 610 attgaggctgaactacctgtcaatgttgttgatataaggctgaggcaagcacaagaaatc 669
|| |||||||| |||||| ||| ||||||| || ||||| ||||| || || ||||||
Sbjct: 671 atcgaggctgatttacctgctaatattgttgacatcaggcttaggcaggctcaggaaatc 730
Query: 670 atagaaaatctactcaaacccgtggatgagacacaggact 709
|||||| | || |||||||| || |||||| |||||||||
Sbjct: 731 atagaagaactgctcaaacctgtcgatgagtcacaggact 770